Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1520 ATGCCGCTCGGAGAAAGGGCTGGGGATAAGAGCGAATCGCGGTATTGTGGTGTGGAGACGGAGTTCAACGATGACATGCCACACGTGCTGGCTTTCAGTCTCACTTCTGGGGGCTTCGATTTCATTGTTGCTTCTCTGATGGATCCTGTCTATCGGCCAAGCTTAGTGCAAAAGAATAGTTTGGGTTCTGGTGTCCTGCCATTCGCTGGGTCAGACTTAGTCTTGAGTCCTTCTCAATGGAGTAGTCATGTAGTGGGAAAAATTAGCTCATGGATAGATTTGGATTCAGAAGATGAGACCCTTAGGATGGATTCTGAAACCACTCTCAAACAAGAAATATCTTGGGCCTCTCATCTTTCTTTACAGGCTTGCCTTCTTCCAGCTCCCAAGGGAACTTCCTGTGCTAACTATGCTAGGTGTGTGAATCAAATCTTGCAGAGCCTAAATAATATGCAGTTATGGCTTAGGATTCCTTTGGTGAAATCTGATGATGACTCCATGGGTGCAAATTCTGATACTTTGATTGATTCCTGGGAAACGTGGAATTCATTTCGTCTGCTCTGTGAGCATCATAATCAATTGTCTATTGCACTTGATATTCTGAGCACCTTACCGTCGGCGAACTCACTTGGACGTTGGTTTGGGGAGTCTGTTAGAGCAGCTATAATAAATACTGATGCGTTTTTAACTAATGGTCGGGGTTATCCATGCCTCTCAAAGCGTCACCAGAAGTTAATCACTGGCTTCTTTAACCATTCTATACAGATAATTATATCTGGAAAACCAGTTCATCCCAAAGCAAGTGTGGATCTAGATGCTTCTCATAATCTTTCTGCTGCGGATTCAGAAAGACATCCCTTGAGGCCCTATCTGGACTATGTTGGGTACTTGTACCAAAGAATGGATCCTATTCCTGAGCAAGAACGTTTTGAGCTTGGTTACAGGGATTTTTTACAGTCACCCTTGCAACCTCTTATGGATAATCTAGAAGCTCAGACCTATGAAACATTTGAGAAGGACACAGTAAAATACATTCAGTACCAAAGAGCGGTTTGTAAAGCATTGCTGGACAGGGTTCCTGATGAAAAGGCATCTGAGATTACCACTGTATTGATGGTTGTTGGTGCTGGGCGTGGGCCTCTTATTCGGGCATCATTAGAGGCAGCTGAAGAAACTGGGCGGAAGCTAAAAGTTTATGCTGTTGAAAAGAATCCAAATGCAGTTGTTACACTTAATAGTTTGATTAGGTTAGAGGGCTGGGAGGATACAGTTACTATAGTCTCAAGTGACATGCGCTACTGGAATGCCCCTGAAAAGGCTGACATATTGGTTAGTGAATTGCTAGGTTCCTTTGGTGACAATGAGCTGTCTCCTGAGTGCCTTGATGGAGCCCAGAGGTTTCTGAAGCAAGATGGAATTTCAATACCATCTTCATACACAAGTTTCATCCAACCAGTTACAGCTTCAAAGTTATATAATGATATTAAAGCACATAAAGATATTGTACACTTTGAAACTGCTTATGTTGTGAAAATACACAATGCTGCCAGGCTTGCACCATCTCAATCTGTTTTTACATTTACTCATCCAAAACACTCGGATAAAGAAAGCAACCAGAGGTATAAAAAGTTGCAGTTTTTGATACCTAATGATACGGGGTCAGCAATGGTACATGGATTTGCTGGCTACTTTGATGCTACACTTTACAAAGATGTGCATCTTGGAATTGAACCTTCAACAGCAACACCAAATATGTTCAGTTGGTTTGCAATATTTTTTCCATTAAGGGCACCCATTTGTGTGGATCCTGGTTCTACTCTGGAAGTACATTTCTGGCGCTGTTGCGGTTCTACAAAGGTTTGGTATGAGTGGTGTGTTTCATCTCCCTGTTCGTCTCCAATTCACAACAGCAATGGACGTTCATACTGGGTTGGGCTTTAG 1941 0.4266 MPLGERAGDKSESRYCGVETEFNDDMPHVLAFSLTSGGFDFIVASLMDPVYRPSLVQKNSLGSGVLPFAGSDLVLSPSQWSSHVVGKISSWIDLDSEDETLRMDSETTLKQEISWASHLSLQACLLPAPKGTSCANYARCVNQILQSLNNMQLWLRIPLVKSDDDSMGANSDTLIDSWETWNSFRLLCEHHNQLSIALDILSTLPSANSLGRWFGESVRAAIINTDAFLTNGRGYPCLSKRHQKLITGFFNHSIQIIISGKPVHPKASVDLDASHNLSAADSERHPLRPYLDYVGYLYQRMDPIPEQERFELGYRDFLQSPLQPLMDNLEAQTYETFEKDTVKYIQYQRAVCKALLDRVPDEKASEITTVLMVVGAGRGPLIRASLEAAEETGRKLKVYAVEKNPNAVVTLNSLIRLEGWEDTVTIVSSDMRYWNAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSSYTSFIQPVTASKLYNDIKAHKDIVHFETAYVVKIHNAARLAPSQSVFTFTHPKHSDKESNQRYKKLQFLIPNDTGSAMVHGFAGYFDATLYKDVHLGIEPSTATPNMFSWFAIFFPLRAPICVDPGSTLEVHFWRCCGSTKVWYEWCVSSPCSSPIHNSNGRSYWVGL 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1520 646 FunFam Protein arginine N-methyltransferase 5 478 646 - -
Glsi08g1520 646 Gene3D - 478 646 - -
Glsi08g1520 646 Pfam PRMT5 oligomerisation domain 478 644 IPR035248 -
Glsi08g1520 646 FunFam Protein arginine N-methyltransferase 5 310 477 - -
Glsi08g1520 646 PIRSF PRMT5 3 646 IPR007857 GO:0006479|GO:0008168|GO:0035246
Glsi08g1520 646 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 333 645 IPR029063 -
Glsi08g1520 646 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 318 624 IPR025799 GO:0016274|GO:0018216
Glsi08g1520 646 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 5 7 646 IPR025799 GO:0016274|GO:0018216
Glsi08g1520 646 Gene3D - 14 301 - -
Glsi08g1520 646 Gene3D Vaccinia Virus protein VP39 302 477 IPR029063 -
Glsi08g1520 646 Pfam PRMT5 arginine-N-methyltransferase 306 475 IPR035075 -
Glsi08g1520 646 FunFam Protein arginine N-methyltransferase 14 307 - -
Glsi08g1520 646 Pfam PRMT5 TIM barrel domain 38 300 IPR035247 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1520 08 11008859 11019179 Glsi08g1520 08 11008859 11019179 ECH