Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1487 ATGATTCCAAGATTGGATTTTTCCAATTGGTGGACAAAAGATAGCCGGGAAGGAACGCCGGTGGTGGTGACAATGGAGAACCCCACTTTCTCGGTTGTAGAAATTAATGGTCCGGACTCTGCATTCCGGCCATTGGAGAAAAACCGTGGTAAGAATGCTAAGCAAGTCACTTGGGTCTTGTTACTTAAGGCTCATCGTGCCGTTGGCTGTGTCACTTGGCTCGCTACAGTTCTGTGGACGTTGTTTGGAGCTGTTAAGAGGAGGTTGGTTTATAGGCAAGGAATAGCTATGGGGAGTGAGAAGTTCGAAAAAGGAAAATTACTATTTAGAGTCCTTCGAGTGTTCTTAGTGACCTCCTTGGCCATTCTAGCGTTTGAGGTGGTTGCTTACCTCCAAGGTTGGCATTTTCCGAATCCCGGCTTGCATATTCCTTCGAGTTGGGATTTTGAAGGCTTGCTCCACATGCTATATGTTGCTTGGTTAACGTTTCGTGTTGAGTACATTGCTCCCCTAATACAGGCACTTTCCAAGTTTTGTGTTGTTCTGTTTCTCATCCAATCAGTGGATCGTATGCTGCTTTGCTTGGGTTGCTTTTGGATAAAATACAAGAAGCTTAAGCCAAAGATTGAGAGGGATCCCTTCAAAATCGACGACATCGAAGGATGTGAATGCACTTATCCCATGGTTCTTGTTCAAATTCCAATGTGTAACGAGAGGGAGGTGTATGAGCAGTCTATTTCTGCAGTCTGCCAAATTGATTGGCCAAGGGACTGTTTACTGATTCAAGTTCTCGATGATTCGGATGATGAGAGCTTACAGTGGTTAATTAAGGCTGAGGTTGCTAAATGGAGCCAAAAGGGAATCAACATAATCTATAGGCATCGCCTAGTCAGGACTGGTTATAAGGCTGGCAATCTCAAGACTGCAATGAACTGCGACTATGTGAAAGATTATGAGTTTGTTGCAATTTTTGATGCGGACTTCCAACCAAATCCTGACTTCCTTAAGCAAACAGTGCCATATTTCAAGGACAATCCTGAACTAGGTCTGGTCCAAGCTAGATGGGCTTTTGTGAACAAGGATGAGAACTTGTTGACTCGTCTCCAAAACATAAATTTATGCTTCCATTTTGAGGTAGAACAGCAGGTCAATGGGGTATTTCTTAACTTTTTCGGTTTCAATGGAACTGCTGGTGTTTGGAGAATCAAAGCCCTAGAAGATTCTGGCGGCTGGCTTGAGAGGACAACCGTGGAGGACATGGACATTGCTGTCCGAGCTCATCTCAATGGTTGGAAATTCATCTTCCTGAATGATGTAAAGGTACTTTGTGAAGTTCCCGAGTCCTATGAAACTTATAGGAAGCAGCAACACCGCTGGCATTCTGGTCCCATGCAACTTTTTAGATTGTGTCTTCCAGCAATTGTGAGATCTAAGATATCAGCATGGAAGAAAGCAAATTTAATACTGCTATTCTTTCTGTTGAGGAAACTTATTCTTCCCTTTTATTCCTTCACCTTATTTTGCATAATTCTTCCTTTAACCATGTTTGTCCCTGAGGCAGAGCTTCCTCTATGGGTAATCTGCTATGTGCCTGTATTTATGTCATTCCTTAACATTCTTCCTGCCCCAAAATGTTTCCCTTTTATTGTTCCCTACCTCCTTTTCGAAAATACCATGTCAGTCACCAAATTCAACGCAATGGTATCTGGACTCTTCCAATTGGGTAGCTCTTATGAATGGATTGTCACGAAGAAGGCTGGCAGGTCATCAGAGTCTGATTTACTGACTGCTGCAGAAAGGGAAGCTGAATCAATAGAACAAGCAAAGATCTCTAGAGCATCTTCTGACAGTGAACTTCCTGAGTCAAATCAATTTAAGGAACAGAAAGAAGCTGCTGCAAAGCCTGTAAAGAAAGTTAACAAACTATATATGAAAGAGTTGACTCTGGCATTCCTCCTTCTGACAGCTTCTGTCCGGAGTTTGTTATCTGCGCAAGGAGTTCACTTTTACTTTCTGCTTTTCCAAGGGGTGACCTTCCTCCTTGTGGGTCTTGATTTAATTGGGGAGCAGATGAGCTAG 2079 0.43 MIPRLDFSNWWTKDSREGTPVVVTMENPTFSVVEINGPDSAFRPLEKNRGKNAKQVTWVLLLKAHRAVGCVTWLATVLWTLFGAVKRRLVYRQGIAMGSEKFEKGKLLFRVLRVFLVTSLAILAFEVVAYLQGWHFPNPGLHIPSSWDFEGLLHMLYVAWLTFRVEYIAPLIQALSKFCVVLFLIQSVDRMLLCLGCFWIKYKKLKPKIERDPFKIDDIEGCECTYPMVLVQIPMCNEREVYEQSISAVCQIDWPRDCLLIQVLDDSDDESLQWLIKAEVAKWSQKGINIIYRHRLVRTGYKAGNLKTAMNCDYVKDYEFVAIFDADFQPNPDFLKQTVPYFKDNPELGLVQARWAFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEDSGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYETYRKQQHRWHSGPMQLFRLCLPAIVRSKISAWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPLWVICYVPVFMSFLNILPAPKCFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRSSESDLLTAAEREAESIEQAKISRASSDSELPESNQFKEQKEAAAKPVKKVNKLYMKELTLAFLLLTASVRSLLSAQGVHFYFLLFQGVTFLLVGLDLIGEQMS 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1487 692 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 223 446 IPR029044 -
Glsi08g1487 692 FunFam probable xyloglucan glycosyltransferase 5 220 445 - -
Glsi08g1487 692 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 158 689 - -
Glsi08g1487 692 MobiDBLite consensus disorder prediction 608 629 - -
Glsi08g1487 692 SUPERFAMILY Nucleotide-diphospho-sugar transferases 229 508 IPR029044 -
Glsi08g1487 692 Pfam Glycosyl transferase family group 2 321 526 IPR001173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1487 Glsi-ChrGlsi08 10819784 10822536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1487 1 692 Miscellaneous Gene Families AT4G31590 79.137 0.0 1117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1487 08 10819784 10822536 Glsi08g1487 08 10819784 10822536 ECH