Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1484 ATGCCAAGGAATATGCCACCATCTTTGCATTTTGCCACCGCCCTTCGTCTCCCTTTGTCTTGGAGACCCAACCTCTCCTTTTTCCGCTCTGCTCCTCTCCATCCGCAACCGCAGCTCCAAGATAGTGATTCTGTTCCAGTAAGGAAGGCGTTTACGCAACCCTTTGGTAGGTGGGTGGGGAGTGGAGATCATCTCTTGCTTTCGTCAATTCCAATGGCGGGGCTGGATAATGAAGCCCGATATATTGACAGTCATGATATTATGAAGATCTTTGCAGCTGAAGGCGTTGAGTCCCTTTTATCTTGTGAAGGAAAGGTACCCTTGTCATCATGCAATGGGAAAAACATCTGCCTTTTTTTCTCTGCAAACTGGTGCAGGCCTTGCAGAACATTCATTCCCCGTCTGGTTGAACTTCATGACACACTGAAAAAGAAGGACAAAAGTGTAGAGATCATCTTCATCTCCTTTGACCGGGATGAGGATGGATTTGAAGAACACTTCAAGAGCATGCCATGGCTAGCTGTCCCATTTGATGTTAATCTGCACAGAAGGCTGATTGACATGTACCAAGTTGTTCGAATTCCATCATTCATTCCATTATGTTCAGATGGCATTACGGTTGAAGAAGACCTGATTGGCTGCATTGAGGATTATGGTGCTGAAGCATTCCCTTTCACAAACAAGAGAAGGGAGGAACTGAAAGCCATAGATCAAAGCAAACGCGATAAAGCAAATTTGGAAGAACTATTAGCTCATGAAGGACGCAATTTTCTCACCTCTGGGGATGATAGAAAGGTACCAATAGCTGAACTTGCAGGTAAAACAATAGGCCTCTATTTTTGTGCTTACTGGTCTCCTCCTTGCCGTGCCTTCACTGTCCAACTTACAGAGGTATACAAGAATCTCAAGACTGCAAAAGACCACTGCTTTGAAATTGTTCTGATCTCAACTGATAGAGACCTCAAGGAATTCAATCTCAACATAAGCAGTATGCCATGGCTTGCTATCCCATATGTGGACAGAACAAGGCATGACCTTTGTAGAATCTTTGATATAAAAGGGATTCCCGCTTTGGTTGTTATTGGACCAGAGGGCAAAGTCATTAGTATGAATGGCAAGTTTGTGGTGTCCTCATATGGTGCTGAAGCTTTCCCATTTACCGAATCACGGATAAGGGACCTTGATGCAGACCTGAGAAAGCAAGGAGAGGCTTTGCCTCGGCAGGTTGAGGATGTGAAGCATGAACATGTGCTGAAATTGGATACGGCCAAAGCATACATGTGTGATTTCTGTAAAAAGCAAGGCAAGTTCTGGGCATTCTCTTGCGATGTCTGTGATTATGACCTTCATCCAAGTTGTGTGGAGAAGGTCAACAAAGATGAAAGCCTCTAG 1392 0.4454 MPRNMPPSLHFATALRLPLSWRPNLSFFRSAPLHPQPQLQDSDSVPVRKAFTQPFGRWVGSGDHLLLSSIPMAGLDNEARYIDSHDIMKIFAAEGVESLLSCEGKVPLSSCNGKNICLFFSANWCRPCRTFIPRLVELHDTLKKKDKSVEIIFISFDRDEDGFEEHFKSMPWLAVPFDVNLHRRLIDMYQVVRIPSFIPLCSDGITVEEDLIGCIEDYGAEAFPFTNKRREELKAIDQSKRDKANLEELLAHEGRNFLTSGDDRKVPIAELAGKTIGLYFCAYWSPPCRAFTVQLTEVYKNLKTAKDHCFEIVLISTDRDLKEFNLNISSMPWLAIPYVDRTRHDLCRIFDIKGIPALVVIGPEGKVISMNGKFVVSSYGAEAFPFTESRIRDLDADLRKQGEALPRQVEDVKHEHVLKLDTAKAYMCDFCKKQGKFWAFSCDVCDYDLHPSCVEKVNKDESL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1484 463 Coils Coil 229 256 - -
Glsi08g1484 463 Pfam C1 domain 413 454 IPR004146 -
Glsi08g1484 463 Gene3D Glutaredoxin 92 229 - -
Glsi08g1484 463 SUPERFAMILY Thioredoxin-like 105 206 IPR036249 -
Glsi08g1484 463 PANTHER THIOREDOXIN 77 416 - -
Glsi08g1484 463 Pfam Thioredoxin-like 273 367 IPR012336 -
Glsi08g1484 463 Pfam Thioredoxin-like 114 200 IPR012336 -
Glsi08g1484 463 ProSiteProfiles Thioredoxin domain profile. 88 241 IPR013766 -
Glsi08g1484 463 SUPERFAMILY Cysteine-rich domain 405 455 IPR046349 -
Glsi08g1484 463 ProSiteProfiles Thioredoxin domain profile. 248 396 IPR013766 -
Glsi08g1484 463 SUPERFAMILY Thioredoxin-like 258 368 IPR036249 -
Glsi08g1484 463 Gene3D Glutaredoxin 250 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1484 Glsi-ChrGlsi08 10803689 10806485 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1484 08 10803689 10806485 Glsi08g1484 08 10803689 10806485 ECH