Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1476 ATGGATCCAAAGAAATCTAACAAGATCAGAGAAATTGTTAGGCTTCAACAGATCCTCAAGAAGTGGAGAAGGCTGGCCGTCTCCTCGAAAATCAGTAGCTATAGCAGCAGCAGTAAAAGCATTAAGTTTCTGAAAAGGACACTTTCTTTATCTGAACGAGAAGGAGGATCAAATAATGTTGTTTTTAAAGGCTACCTCGCTGTTTGCGTTGGGGAAGAGCTGAAGAGGTTCATTATACCTACTGAGTATCTGGGCCATCAGGCCTTTCACATATTACTGAGAGAAGCAGAAGAAGAATTCGGGTTGCAACAGACTGGCGTTCTGAGGATTCCTTGTGAAGTGCCTGTTTTTGAGAGTATCTTGACGATGGTGGAGGGAACGAAGGACAAGTTTCATCCCCCGGCATGTAGACTTAGCGTTGAAGATATAACGGGATACTGCTCATCAGAAAACCAGCTTGCTTATTCTCACCATCCCCAAAGTCCAATGTGCAGATAG 498 0.4378 MDPKKSNKIREIVRLQQILKKWRRLAVSSKISSYSSSSKSIKFLKRTLSLSEREGGSNNVVFKGYLAVCVGEELKRFIIPTEYLGHQAFHILLREAEEEFGLQQTGVLRIPCEVPVFESILTMVEGTKDKFHPPACRLSVEDITGYCSSENQLAYSHHPQSPMCR 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1476 165 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 39 121 IPR003676 GO:0009733
Glsi08g1476 165 Pfam Auxin responsive protein 20 124 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1476 Glsi-ChrGlsi08 10750067 10750564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1476 1 165 Calmodulin-binding Proteins AT2G24400 53.552 2.79e-53 165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1476 08 10750067 10750564 Glsi08g1476 08 10750067 10750564 ECH