Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi08g1469 | ATGCCAGAGAGTGAGGTAAATCCAACTATCAGCAAATCGACTGGACTGCCTCGGAAGCGTTTCTATCGAGCACGAGCACACAGCAATCCACTGAGTGACTCCCACTTCCCCATACCGATATCTCCTAGTCATGTTGACTATTCCCTCCATTACCCTCAGTTCTTTCCCTCGTCCGGTCAAGCTAATAACTCTAAGAAGATTCAGTTTGCTGATATTGGCTGTGGTTTTGGTGGACTGCTTATCAGTCTTTCAACCCTTTTCCCGGAAACCCTGATGATTGGAATGGAACTTAGAGATAAAGTGACAGAGTATGTCAAGGAACGGATTTTAGGTCTAAGAGTAGCAAACCCAGGTCAATATGAGAATATCTCAGTGGTTCGGACAAACTCCATGAAGTACATCCCCAATTACTTTGAGAAAGGACAGCTATCAAAGATGTTTTTCTTGTTTCCTGATCCTCACTTCAAAGAGAAGAATCATCGTCGGCGTGTGATCAGTCCACACTTGCTAGATGAGTATGCTTATACTCTTGAGGTTGGTGGGATTATATACACAATAACGGACGTAGAAGAGCTTGGAGAGTGGATGAAGTCTTGTCTGGAGAATCACCCCATGTTTGAAGCCCTGACTGAGAAAGAACTTGAAGCGGATCCAGTTGTGAGGCTTTTAAGTTCTGCAACTGAGGAAGGCCAAAAGGTTGCTAGAAATGGGGGACAAACTTTCCAAGCCATATACAGACGCATTGCGCTATCTGATTAA | 759 | 0.4427 | MPESEVNPTISKSTGLPRKRFYRARAHSNPLSDSHFPIPISPSHVDYSLHYPQFFPSSGQANNSKKIQFADIGCGFGGLLISLSTLFPETLMIGMELRDKVTEYVKERILGLRVANPGQYENISVVRTNSMKYIPNYFEKGQLSKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYTLEVGGIIYTITDVEELGEWMKSCLENHPMFEALTEKELEADPVVRLLSSATEEGQKVARNGGQTFQAIYRRIALSD | 252 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi08g1469 | 252 | PANTHER | 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE | 16 | 247 | IPR003358 | GO:0006400|GO:0008176 | |
| Glsi08g1469 | 252 | FunFam | tRNA (guanine-N(7)-)-methyltransferase | 45 | 247 | - | - | |
| Glsi08g1469 | 252 | Gene3D | Vaccinia Virus protein VP39 | 45 | 247 | IPR029063 | - | |
| Glsi08g1469 | 252 | ProSiteProfiles | SAM-dependent methyltransferase TRMB-type domain profile. | 19 | 247 | IPR003358 | GO:0006400|GO:0008176 | |
| Glsi08g1469 | 252 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 64 | 244 | IPR029063 | - | |
| Glsi08g1469 | 252 | CDD | AdoMet_MTases | 69 | 186 | - | - | |
| Glsi08g1469 | 252 | Pfam | Putative methyltransferase | 67 | 242 | IPR003358 | GO:0006400|GO:0008176 | |
| Glsi08g1469 | 252 | NCBIfam | tRNA (guanosine(46)-N7)-methyltransferase TrmB | 62 | 247 | IPR003358 | GO:0006400|GO:0008176 | |
| Glsi08g1469 | 252 | Hamap | tRNA (guanine-N(7)-)-methyltransferase [METTL1]. | 16 | 248 | IPR025763 | GO:0008176 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Glsi08g1469 | 08 | 10652081 | 10652839 | Glsi08g1469 | 08 | 10652081 | 10652839 | ECH |