Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1440 ATGGTGGAACGAGCCACGAGCGACATGCTCATTGGCCCTGATTGGGCGATGAATATCGAGATCTGTGACATGCTGAATAATGACCCTGGGCAAGCAAAGGATGTTGTTAAAGCTATAAAGAAGCGGATTGGAAGTAAGAATTCAAAAGTTCAACTTCTTGCACTAACGCTACTGGAGACAATCATAAAAAATTGTGGGGACATTGTTCACATGAATGTTGCAGAGAGAGATGTTCTTCATGAGATGGTGAAAATAGCAAAGAAGAAGCCTGATTTTCATGTCAGAGAGAAGATACTGATTCTTATAGATACTTGGCAAGAAGCTTTTGGAGGACCAAGGGGAAGATATCCACAGTATTATGCTGCATATCAGGAACTGTTGCGTGCTGGGGCAGTATTCCCCCAGAGGTCTGAGCAATCTACACCTGTGTTCACACCTCCGCAAACACAACCATTGGCATCATACCCTCAAAATTTACGCAACTCTGATGTCCGGCAGGACACAGCTGAGTCCTCTGCGGAGCCTGAGTTTCCAGCCCTAAGTTTGACCGAAATTCAGAATGCACGTGGTATTATGGATGTTCTTGCAGAAATGCTCAGTGCCTTAGAACCAGATAACAAAGAAGGTCTTAGGCAGGAGGTTATTGTTGATTTGGTGGACCAGTGTCGATCCTACAAGCAGAGAGTGGTACATCTTGTTAACACAACTTCGGATGAATCACTGCTATGCCAAGGACTAGCTCTCAATGATGACCTACAGCGTGTACTAGCAAAGCATGAAGCCATTGCTTCAGGTACTTCTGCAAATCAAACAGAGAAATTGAAGCCTGCACCTGCTGGAGCACTTGTAGATGTTGATGGTCCTTTGGTTAATACTGGAGATACGAGCAAACAAACTGATGGGAGATCCAGTTCTAGTGCTGAAGCTGGGTCCCAAACATTGAATCAGTTATTGCTTCCTGCTCCCCCCACTTCTAATGGTTCAGCTCCCCATGCTAAGGCTGACCCCAAAATGGACTTGCTCAGTGGTGATGACTATAACTCACCAAAAACAGAGGCTTCGCTTTCCCTTGTTCCTGTAGGAGAACAGCAGCCAGCCAGTCCTGTGTCTCAGCAGAACGCCCTTGTTCTTTTTGATATGTTCTCAAATGGAAACAACGCACCAACTTCTGTCAATACTCAGCCTACCCAGTCAATTAATGTTGCTGGACAAACCAGTCCATTAGCCCCCCATCTTCAACAACAGCAGACTCTCATCTCTCCTCAAGGTGGATTTTACGCCAATGGAAGTGTGCCTAATATGGGGTCACCTCACTATGAGCAATCGCTATACTCACAAGGCACAGGTCCTGCCTGGAATGGTCAGGTCACGCAGCAGCAACAGCCATCACTTTCACCAGTTTATGGTGCACAAAGCAGTGGATCATTGCCACCACCCCCCTGGGAAGCTCAACCAACAGAAAACGGTAGTCCAGTAGCAGGAACCCATTCTCCGCAACCACTGCCAGTCACACAAGTGGTTATGACACATGTACCAAGTAATGCACATCCACAGGGATCTCCTGCATTGGGAAATGACCAGGTTGTTGATATGTATATGCAGCCAAATGCTAACAGCCATATGTCAGCTATCAATAGCCATGCTGGTCAAAGCAATCCAAGAGCCTTGCACCCTCAACATATTCAGGGGGGTGCAGGGCCCTATATGGGTATGTTTTCACATCAATTGCAAGCTGCTCCTGTGGCATCAATGTATCCTCAGCAGATATATGGCAACCAATTCTTAGGATATGGCTACGGTCAGCAACAAGGGGTTCAATATCTTCAGCAGCAAATGTATGGCCTGCCTATTAGAGATTATAGTGGTTTGAGAAACTCTTACCAGGTTTCTGCTTCACCTTACGTGCCATCTGGCAAGCCTTCCAAGCCAGAGGATAAGTTATTTGGGGACCTTGTTGACATGGCAAAAGTGAAGCCAAAACCCGCTCCAGGCCAAGCTGGTGGCATGTAA 2010 0.4652 MVERATSDMLIGPDWAMNIEICDMLNNDPGQAKDVVKAIKKRIGSKNSKVQLLALTLLETIIKNCGDIVHMNVAERDVLHEMVKIAKKKPDFHVREKILILIDTWQEAFGGPRGRYPQYYAAYQELLRAGAVFPQRSEQSTPVFTPPQTQPLASYPQNLRNSDVRQDTAESSAEPEFPALSLTEIQNARGIMDVLAEMLSALEPDNKEGLRQEVIVDLVDQCRSYKQRVVHLVNTTSDESLLCQGLALNDDLQRVLAKHEAIASGTSANQTEKLKPAPAGALVDVDGPLVNTGDTSKQTDGRSSSSAEAGSQTLNQLLLPAPPTSNGSAPHAKADPKMDLLSGDDYNSPKTEASLSLVPVGEQQPASPVSQQNALVLFDMFSNGNNAPTSVNTQPTQSINVAGQTSPLAPHLQQQQTLISPQGGFYANGSVPNMGSPHYEQSLYSQGTGPAWNGQVTQQQQPSLSPVYGAQSSGSLPPPPWEAQPTENGSPVAGTHSPQPLPVTQVVMTHVPSNAHPQGSPALGNDQVVDMYMQPNANSHMSAINSHAGQSNPRALHPQHIQGGAGPYMGMFSHQLQAAPVASMYPQQIYGNQFLGYGYGQQQGVQYLQQQMYGLPIRDYSGLRNSYQVSASPYVPSGKPSKPEDKLFGDLVDMAKVKPKPAPGQAGGM 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1440 669 FunFam TOM1-like protein 2 1 144 - -
Glsi08g1440 669 Pfam GAT domain 190 264 IPR004152 GO:0035091|GO:0043130
Glsi08g1440 669 ProSiteProfiles VHS domain profile. 5 134 IPR002014 GO:0035091|GO:0043130
Glsi08g1440 669 SMART VHS_2 1 130 IPR002014 GO:0035091|GO:0043130
Glsi08g1440 669 MobiDBLite consensus disorder prediction 428 472 - -
Glsi08g1440 669 MobiDBLite consensus disorder prediction 291 323 - -
Glsi08g1440 669 Gene3D - 179 272 IPR038425 -
Glsi08g1440 669 CDD GAT_GGA-like_plant 184 262 - -
Glsi08g1440 669 SUPERFAMILY ENTH/VHS domain 1 134 IPR008942 -
Glsi08g1440 669 CDD VHS 1 128 - -
Glsi08g1440 669 ProSiteProfiles GAT domain profile. 176 264 IPR004152 GO:0035091|GO:0043130
Glsi08g1440 669 MobiDBLite consensus disorder prediction 138 168 - -
Glsi08g1440 669 MobiDBLite consensus disorder prediction 428 500 - -
Glsi08g1440 669 SUPERFAMILY GAT-like domain 137 265 - -
Glsi08g1440 669 Gene3D - 1 144 IPR008942 -
Glsi08g1440 669 MobiDBLite consensus disorder prediction 138 175 - -
Glsi08g1440 669 Pfam VHS domain 2 120 IPR002014 GO:0035091|GO:0043130
Glsi08g1440 669 PANTHER TOM1-LIKE PROTEIN 1 660 IPR044836 GO:0035091|GO:0043130|GO:0043328
Glsi08g1440 669 MobiDBLite consensus disorder prediction 281 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1440 Glsi-ChrGlsi08 10470535 10477945 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1440 08 10470535 10477945 Glsi08g1440 08 10470535 10477945 ECH