Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1428 ATGGCAGCTTCGCATACAGCATTTCTTGTGAAATGCTCCATTCAGAAAATACCCAGCTTTGTCTCCGATAGTTTTCATCACTTCAGCATTCCCCTCTCCCTGCTTCCAAGAGCTCTTCCTTTGCAAATAGATGTTCCCAAAACCATGAAAAACACAACGGCTAAAATACTGGACGCTTTTGTGGATTCAGTCTTCGAGTTCATTGACCAGCCTCTGCCTCCATCTAAGTGTAACTTTGCTCCAGTGGAGGAGTTGGGGGAACCCATGCTTATCGCCGACATAGAAGGACAAATCCCAGATGATTTTCCGGAGGGCGTCTACATCAGAAATGGACCAAATCCACTATTTGGAGGACTGAAATCAACCAAATCTATCTTTGGGAGGTCAAGTAACATTTGGGTGGAAGGAGAAGGAATGCTTCATGCCTTGTATTTTAAAAAAGCAAGTCATGGGAGCTGGACGGTCATCTACAACAACAGACATGTTGAAACCGAAAACTACAAGCTAGAGAAACAAATAAACAAGCCATTATTTCTCCCGGCCATAGAAGGCGATTCGCCGGCCATTTTGTCTGCTTATCTGCTAAACTGGTTGAGATTTGGCAAAGTGAACAAATATATTAGCAACACCAATGTGTTTGAGCATTCGGGGAAGTTTTACTCAATTGCTGAAAATCACATCCCACAAGAGATTGACATCTTTACACTGAAAACCTTGGAAAATTGGGATGTCTGTGGAGCCTGGGATCGACCTTTTGTCAGCCACCCGAAGAAAGCTCCAGGTACAGGAGAGCTGGTTACATTGGGCGTAGCTGCAACTAAGCCTTTTGTGGCACTTGGAATCATTTCTGATGATGGAAAGAAATTGATTCATAAAGTGGATATCAAATTAAGCAGGTGCAGCCTTTGCCATGACATAGGCATTACACAAAGGTACAATGTAATAATGGATTTTCCACTAACCATAGATCTGAACAGACTTTTTAGAGGAGGCCCATTATTAAAGTATAATAAGGCCGGATATGCAAGAATCGGGGTAATGCCGCGCTATGCTGATGCCAACTCAATCCAGTGGTTTGAGGTAGAACCTAATTGCACATTTCACATTATCAATTCTTTTGAGGATGGCCAGGAGGTTGTAGTGTGGGGCTGCAGAGCTCTTGATTCGCTAGTTCCTGGACCCGACCTGACTTCCAATGAATTTGAGTCATTTTCTCGTTGTTACGATTGGAGACTGAATATGAAAACCAGGCAAGTTAAGGAGAAATATCTCAGGGGAGCAAAAGTAGAGTATATGGATTTTCCTATGATCAATCCAAATTTCGTAGGTATTAAGAATAGATATGGATACACACAAGTGGTCGATCCTGTAGCCAGCTCTATTGCAGACGTGCCTAGATATGGAGGTCTGTCCAAGCTTTACTTTGACGAACCATGTACAGAGTTGTCTACCAAAGACAAACAACATAAAGAACCTATGAGGGTGGAATACCATATGTTTGAGAAGAATGCATTTTGCACCGGAGCTGCCTTTGTCCCTAAAAACTATGGGGCTGAAGAAGATGACGGTTGGATCATCACTTTTGTTCACAACGATGATACCGGCATATCTCAAGTTCATATAATTGACACAAAAAAGTTATCTGGTGAGTCAGTTGCCAAAATTACAATGCCTCGCCGAGTTCCATATGGCTTTCACGGAGCTTTCATGCCAATCTCATTGGAGGCTTAG 1731 0.4269 MAASHTAFLVKCSIQKIPSFVSDSFHHFSIPLSLLPRALPLQIDVPKTMKNTTAKILDAFVDSVFEFIDQPLPPSKCNFAPVEELGEPMLIADIEGQIPDDFPEGVYIRNGPNPLFGGLKSTKSIFGRSSNIWVEGEGMLHALYFKKASHGSWTVIYNNRHVETENYKLEKQINKPLFLPAIEGDSPAILSAYLLNWLRFGKVNKYISNTNVFEHSGKFYSIAENHIPQEIDIFTLKTLENWDVCGAWDRPFVSHPKKAPGTGELVTLGVAATKPFVALGIISDDGKKLIHKVDIKLSRCSLCHDIGITQRYNVIMDFPLTIDLNRLFRGGPLLKYNKAGYARIGVMPRYADANSIQWFEVEPNCTFHIINSFEDGQEVVVWGCRALDSLVPGPDLTSNEFESFSRCYDWRLNMKTRQVKEKYLRGAKVEYMDFPMINPNFVGIKNRYGYTQVVDPVASSIADVPRYGGLSKLYFDEPCTELSTKDKQHKEPMRVEYHMFEKNAFCTGAAFVPKNYGAEEDDGWIITFVHNDDTGISQVHIIDTKKLSGESVAKITMPRRVPYGFHGAFMPISLEA 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1428 576 PANTHER BETA-CAROTENE DIOXYGENASE 88 570 IPR004294 GO:0016702
Glsi08g1428 576 Pfam Retinal pigment epithelial membrane protein 80 571 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1428 Glsi-ChrGlsi08 10389970 10393434 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1428 08 10389970 10393434 Glsi08g1428 08 10389970 10393434 ECH