Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1422 ATGTCTTACTCAACCTTGCCTCCTATCAGAAACTCCATTTCATGCCCAATAATGATGGTTTCTGATAAGTCTGATAACATCAAGGATGGGTTTTCGTTTGGGAATAAGGGCTTCTTTAAAAGCCAACGCCTTTTTCAAGACTTGACTGTCACTAATGTTGTGAGTCCATTGCCTTGGACTGCTCCCCCACTCACACCGGCAGAAAGATCAGAAACCACCGGCCGCCGCCACCATCCTGCATGGACTAGTATCCCACAAGAGAGATGGGAAGGAGAGCTGGTTGTTCAAGGACAAATACCCTTATGGCTGAAAGGAACGTACCTAAGGAATGGTCCGGGCATGTGGAACATAGGGGACTACAACTTCCGGCACCTCTTTGATGGGTATGCCACTCTAGTCAAGCTTCACTTTGAGAACGGCCGATTAATAGCCGGCCATCGCCAAGTGGAATCGCAAGCCTATAAAGCTGCTAAGAAGAATAAAAAACTATGTTACCGTGAATTCTCTGAAGCGCCCAAACCTTCTAATTTCTTAGCCTATGTGGGTGACCTTGCTGGTTTGTTCTCCGGCGCTTCACTAACTGACAACGCTAACACAGGCGTTGTAAAACTGGGTGATGGGCGGGTGGTTTGCCTGACGGAGACCCAAAAAGGGTCCATTGTGATAGATCCGGACACATTGGAGACAGTGGGGAAATTTGAGTATAGTGATAGATTAGGGGGTCTCATACACTCAGCACACCCAATCGTGACAGATACAGAATTTTTGACGTTACTGCCAGACTTGATAAACCCAGGGTACCAGGTGGTTAGGATGGAAGCTGGATCCAACGAACGGAAGGTGATAGGGCGGGTAAATTGCAGGGGCGGGCCAGCGCCGGGTTGGGTCCACTCCTTCCCGGTGACGGAACACTACGTCATTGTGCCTGAAATGCCATTGAGATATTGTGCCCAGAATCTACTGAAAGCTGAGCCCACACCATTATACAAGTTTGAGTGGCACCCTGATTCCAAAGGTTTTGTTCATGTTATGTGCAAGACTAGCGGAAAGATTGTGGCAAGTGTGGAAGTACCTTTGTTCATTACGTTCCATTTCATAAATGCATATGAAGAGGAAGACGACGATGGAAGAGTGACGGCAATTATTGCCGACTGTTGTGAGCACAACGCAGAGGTTGCTATTCTCGATAGGCTTAGGCTACAGAATCTCCGCTCATTCAGCGGCCAAGATGTTCTACCAGATGCTAGGGTTGGTCGGTTCATAATACCACTGGATGGGAGTCCCTATGGCAAATTAGAGGCAGCATTAGACCCAGATGAACACGGGAGAGGCATGGATATGTGCAGTATCAACCCTAATTATTTGGGCAAAAAATACAGATACGCCTATGCATGTGGAGCGCAGCGCCCTTGTAACTTCCCCAACACCCTCACCAAGCTTGATTTAGTGGAGAAAAAGGCAAAGAATTGGCATGAAGAAGGTGCTGTTCCCTCAGAGCCCTTCTTCGTGGCTCGACCAGGAGCAACAGAAGAAGACGATGGCGTGGTTATCTCCATAATCAGTGAGAAAAATGGAGACGGATATGCGTTATTGTTAGATGGTTCCACCTTTGAAGAGATTGCCAGAGCTAAGTTCCCTTATGGACTGCCATACGGATTGCATGGATGCTGGGTTTCAAAAAATTGA 1686 0.4763 MSYSTLPPIRNSISCPIMMVSDKSDNIKDGFSFGNKGFFKSQRLFQDLTVTNVVSPLPWTAPPLTPAERSETTGRRHHPAWTSIPQERWEGELVVQGQIPLWLKGTYLRNGPGMWNIGDYNFRHLFDGYATLVKLHFENGRLIAGHRQVESQAYKAAKKNKKLCYREFSEAPKPSNFLAYVGDLAGLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPDTLETVGKFEYSDRLGGLIHSAHPIVTDTEFLTLLPDLINPGYQVVRMEAGSNERKVIGRVNCRGGPAPGWVHSFPVTEHYVIVPEMPLRYCAQNLLKAEPTPLYKFEWHPDSKGFVHVMCKTSGKIVASVEVPLFITFHFINAYEEEDDDGRVTAIIADCCEHNAEVAILDRLRLQNLRSFSGQDVLPDARVGRFIIPLDGSPYGKLEAALDPDEHGRGMDMCSINPNYLGKKYRYAYACGAQRPCNFPNTLTKLDLVEKKAKNWHEEGAVPSEPFFVARPGATEEDDGVVISIISEKNGDGYALLLDGSTFEEIARAKFPYGLPYGLHGCWVSKN 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1422 561 Pfam Retinal pigment epithelial membrane protein 87 559 IPR004294 GO:0016702
Glsi08g1422 561 PANTHER BETA-CAROTENE DIOXYGENASE 87 559 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1422 Glsi-ChrGlsi08 10357403 10360291 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1422 08 10357403 10360291 Glsi08g1422 08 10357403 10360291 ECH