Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1417 ATGGATGGTCAACTTGGCATTAACGGAGAGGACTTCCATGATGAAAATCATATTGATGGAGATTATTCTCTAGTGCCCTGCTTATTGAACAAGTTTCTTGAGTTGCACCCCCCAGATTCTTCAACAGACTTATCAGAAGCAGAAGGCAAAGCATCACTAAAGATATCTGCTGTCAAAGCAGGAGGAATGATGTCTCTGGCTATTGATAACCTTGGGGCCCTATGGATGTGGGGAAACTGCCCACAGAAAAGCAAAGAAGGAGGCTTCTCTCTTGTTAGCAGTTTCACTCCCACACCAGTATGGGATTTTCATGGTCACACTGTTGTCAAGGTTGCATGTGGAAATGAGCATGTTGTAGCACTGGTTAGTGCTGGAGAATCATACAAGGGTGAAGATCTAGTGTGCTACTCTTGGGGTGGTAATAACCATGGTCAATTAGGCTTGGGGGATAGGGATAGTAGGCCGCATCCAGAAGTTGTAAAAACATTTGACGAGGAGTCTCCTTGGGCAATTTATGAGGTAGCATGTGGTGCCCTTCACACGGCTTTGCTCACTCGCAAAAAGAGACCAAGTGACACATCAGAAAGCATGTGCTGGACGTTTGGACTCGGGGATAATGGGCAACTTGGGCATGGAACAACACAAAGTGCATTGTTTCCCACGCCTGTTACAGAATTGCCACAATATGTATATCTAGTTTCTATTGATTGTGGCTTGTTCCATACGAGCGTTGTTTCATCAGCTGGGGATGTGTGGTCATGGGGAATGGAGAAGGGTCTTGGCCTATGCCCTGATGCTAGTTATGCCGGAACTGATTCTGGTGATGCTCTCTCTCCCCTGCTTATCTCATGCTGGCCGTATCAACCTAAATTTCCAGATCCAATTCAAGTGGCTTGTGGAGCTGCACATACTGTTATTGTTGCACAGGAGGGATATAAGCTTTGGTCTTGGGGTAGGGGAAGGAGTGGGGTTCTTGGAAATGGCAAGGCAGATGATTTTTACACTCCCACAATAGTGCTATGGCCTCCGCTGATTGAGGATTTCAAGCAAGAGGAACTAAAGAGTTCTGGAGAGCAAGAAAAGATCACAGAAAAGGAGATCGAAGCAGTCACAGACACAGATGAGAAATTATCTTCAGCATTGAAGGAACTGAAGCTCCTTCAGACAAAGCTTTCTATAATGGAAAGATATGCTAGTATACTTCATGGCTCAATTTTTGGGAGACCTTTTGATGAGGAGCATGATATCCCTGTTTCATTGAGGAACTCAGGTGCATTCGACATTGCAAATGAATGGGAGAACATGTTAGAGGCAGCTGATCATAGTAAGCTAATTAGGTTGGAAATGTTTTACAGAAACATGCTTGCTGGTGTGAAAGATAAACTGATGAAGAGAAGGATCAAGGAGATTATAAAGGAATGCCTCCAAACGTAG 1434 0.4449 MDGQLGINGEDFHDENHIDGDYSLVPCLLNKFLELHPPDSSTDLSEAEGKASLKISAVKAGGMMSLAIDNLGALWMWGNCPQKSKEGGFSLVSSFTPTPVWDFHGHTVVKVACGNEHVVALVSAGESYKGEDLVCYSWGGNNHGQLGLGDRDSRPHPEVVKTFDEESPWAIYEVACGALHTALLTRKKRPSDTSESMCWTFGLGDNGQLGHGTTQSALFPTPVTELPQYVYLVSIDCGLFHTSVVSSAGDVWSWGMEKGLGLCPDASYAGTDSGDALSPLLISCWPYQPKFPDPIQVACGAAHTVIVAQEGYKLWSWGRGRSGVLGNGKADDFYTPTIVLWPPLIEDFKQEELKSSGEQEKITEKEIEAVTDTDEKLSSALKELKLLQTKLSIMERYASILHGSIFGRPFDEEHDIPVSLRNSGAFDIANEWENMLEAADHSKLIRLEMFYRNMLAGVKDKLMKRRIKEIIKECLQT 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1417 477 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 196 248 IPR000408 -
Glsi08g1417 477 SUPERFAMILY RCC1/BLIP-II 46 343 IPR009091 -
Glsi08g1417 477 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 133 187 IPR000408 -
Glsi08g1417 477 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 249 310 IPR000408 -
Glsi08g1417 477 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 46 379 - -
Glsi08g1417 477 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 174 184 IPR000408 -
Glsi08g1417 477 Gene3D - 2 369 IPR009091 -
Glsi08g1417 477 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 72 124 IPR000408 -
Glsi08g1417 477 Pfam Regulator of chromosome condensation (RCC1) repeat 199 244 IPR000408 -
Glsi08g1417 477 Pfam Regulator of chromosome condensation (RCC1) repeat 136 184 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1417 Glsi-ChrGlsi08 10337104 10338634 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1417 08 10337104 10338634 Glsi08g1417 08 10337104 10338634 ECH