Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1404 ATGGCAGAGGAATCCAATACTAAATGGGAAGGTAAAGCCAGTGTTGAGCTACCGAAGAGTGGCGCAGAGCAAGTATGGCCGCTGTTAGAGGACTTCTGTAACCTTCATAAATGGATGCCCATAGGCACATGCTACCAAGTAGAGGGGGTTCCTGCTCAGCCTGGCCTCGTTCGCTACTGCGCTGCCACCGTCACAGCAACAGGTGAAGCTGATGAGACCAGCATCAGATGGGCCAAAGAAAAGCTACTCATGTTGGATCCCATCCAACGTTGTTTAACCTATGAGATTGTTGATAACAACATAGGATTCAAGTCCTATGTCGCCACATTCAAAGTACTGCCAACCCAGAGCGGTGATGATGAACGAGGGTGCAAGATCGAATGGTCGTTTGTCAGTGACCCAGTGGAAGGGTGGAGATTCCAAGATTTGATCTCTTATATTGAGTCTTCTCTCCACTCCATGGCCAACAAAATGGAGCTAGCATGCTCTGCTACTCAGTGA 501 0.487 MAEESNTKWEGKASVELPKSGAEQVWPLLEDFCNLHKWMPIGTCYQVEGVPAQPGLVRYCAATVTATGEADETSIRWAKEKLLMLDPIQRCLTYEIVDNNIGFKSYVATFKVLPTQSGDDERGCKIEWSFVSDPVEGWRFQDLISYIESSLHSMANKMELACSATQ 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1404 166 Pfam Polyketide cyclase / dehydrase and lipid transport 13 155 IPR019587 -
Glsi08g1404 166 Gene3D - 2 165 IPR023393 -
Glsi08g1404 166 FunFam Lachrymatory-factor synthase 2 163 - -
Glsi08g1404 166 SUPERFAMILY Bet v1-like 21 159 - -
Glsi08g1404 166 CDD PYR_PYL_RCAR_like 9 159 - -
Glsi08g1404 166 PANTHER LACHRYMATORY-FACTOR SYNTHASE 3 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1404 Glsi-ChrGlsi08 10266350 10266850 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0891 10 5743688 5744185 Glsi08g1404 08 10266350 10266850 CCT
Glsi08g1404 08 10266350 10266850 Glsi08g1404 08 10266350 10266850 ECH