Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1398 ATGACTTCTACCGAAAACACGAGAGATAACCATGATCCATTTTGGAGGGCTCTTTTCTCTTGGGACACAAGCTTTGCAGGGCTTAAATCCGGCGATCTCCCCGATTACATGATACTTGAATTGGGCTCGATGACCACAAAATCACACAAGCCCAAGCCTAACTCAACGTTCGGTACTACCGTTTCAATTCCATCACTTTGCTTGGAACAAACCCTAGAGAGCCTAGTAGCAATGGAAGACGATAGAATGCTCGAGAGGGAGAGGCATCAGATCGAGCAGATTCGCCAGCTCGATCTCGAGGAATTGCAGGTTGAGGAAGTTGATGACCTCCAAGACTCATCCGATGATGAACAGGACGCCGCTGGCCGTGGCTATGTTAGGGCTGCCTCATCTGGTGATTTCAATTTTGATACCTGTATAGCTTCTTTACATACATATCTCGGCGAGGTTGAAGACACACACCACAGGACAGCTTTCTTGGACGGTGGTGCTCTTTTGAACCTCCCACTTTTCTATCTTGAAGGAGTTGTACTCTTTCCTGGGGCTACTCTTCCCCTGAGAGTTATTCAATCCAATTTTGTGGCTGCTGTTGAGAGAGCGTTGGTCCAAGTTGATGTTCCTTACACTATTGGTGTGATTAGAGTTCACAGGGATACTGAAAATCATAGGGTAAAATTGGCAAGCATTGGAACAACTGCAGAGATTCGACAATACAGGCGGCTAGAGGATGGTTCACTAAATGTGGTTACCCGTGGACAACAGCGATTTCGACTAAGACGATATTGGAGTGATGTAGAAGGAGTGCCTTGTGGAGAGATCCAAATTATTGAGGAAGATCTACCATTAAGAACTCCCAGGGATGCTTTTGGAAAATTAGCACCATTAAGTAATCTTCCCCGTAACCATGCCATCTCACACATGCCTACAATTTATTCTCGAGCTAAAGTGCATGGGTCCAAAACTGGGGAAAATGATTCAGAAAGTAATTCAGAAGAGAGCTTTGAGGGTGAGCTTTCACTAATGGAAAAGAGAATCCACCAATCAATCATTGGTTCTGGTCATGAGCATCGTATTATGGATGAATCATCAAGCAGTGATTATGATGATTGCATGTATGAGTCAGATCAGGAAATTAGATCTAATCTAAATGACTCTGACTCCGTAGGCTCATTGCTTTCTGACCATGGCAAACAAGCTTTAAATATGGGCCTTATAAGTGGGAGCTGTTCCACTTCTGTTCAGCCATCCTGCAGAGGGGAAGAGTGTAAAAATACAAATGGCAACTTCTCACATGGAATTTCAAGAGCGTTCTTGCCCCATTGGGTATATCGTATGTTTGACTCCTATTGCCTTGCACAGAGGGCAGCAGATATGTGGAACAATGTAGTTGGGGCGCCAAGCATGGATGGTCTTGTGAAGAAGCCTGATGTTTTATCATTTTACATTGCCAGTAAAATACCTGTGTCTGAATCTACAAGACAGGAACTTTTGGAGATTGATGGCATCTCTTATAGATTGCGTAGGGAGATTGAATTACTAGAGACTGTTAATCTTATTCGATGTAAAAACTGCCAGACTATCATTGCAAGGCGAAGTGATATGTTGGTGATGTCTAGTGAGGGTCCTCTTGGTGCTTATGTGAATCCGGGTGGTCATGTGCATGAGATAATGACTCTTTACAAAGCAAGTGGCTTAGCGCTAGTTGGGCCATCAGTCACTGAATACAGTTGGTTTCCTGGGTATGCATGGACAATCACCACCTGTGCTACATGTGAAACCCAAATGGGGTGGCTTTTTACAGCAACGAACAGAAAACTGAAACCCAAATCATTTTGGGGGATACGGAGTTGTAAAGTTGCAGAAGAGATGCGCTAA 1875 0.4405 MTSTENTRDNHDPFWRALFSWDTSFAGLKSGDLPDYMILELGSMTTKSHKPKPNSTFGTTVSIPSLCLEQTLESLVAMEDDRMLERERHQIEQIRQLDLEELQVEEVDDLQDSSDDEQDAAGRGYVRAASSGDFNFDTCIASLHTYLGEVEDTHHRTAFLDGGALLNLPLFYLEGVVLFPGATLPLRVIQSNFVAAVERALVQVDVPYTIGVIRVHRDTENHRVKLASIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRRYWSDVEGVPCGEIQIIEEDLPLRTPRDAFGKLAPLSNLPRNHAISHMPTIYSRAKVHGSKTGENDSESNSEESFEGELSLMEKRIHQSIIGSGHEHRIMDESSSSDYDDCMYESDQEIRSNLNDSDSVGSLLSDHGKQALNMGLISGSCSTSVQPSCRGEECKNTNGNFSHGISRAFLPHWVYRMFDSYCLAQRAADMWNNVVGAPSMDGLVKKPDVLSFYIASKIPVSESTRQELLEIDGISYRLRREIELLETVNLIRCKNCQTIIARRSDMLVMSSEGPLGAYVNPGGHVHEIMTLYKASGLALVGPSVTEYSWFPGYAWTITTCATCETQMGWLFTATNRKLKPKSFWGIRSCKVAEEMR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1398 624 CDD CRBN_C_like 519 615 IPR034750 -
Glsi08g1398 624 FunFam Blast:Protein cereblon homolog 512 624 - -
Glsi08g1398 624 Gene3D - 157 277 IPR046336 -
Glsi08g1398 624 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 518 611 IPR004910 -
Glsi08g1398 624 Gene3D Peptide methionine sulfoxide reductase. 512 624 - -
Glsi08g1398 624 FunFam Lon protease homolog 447 511 - -
Glsi08g1398 624 Gene3D - 447 511 - -
Glsi08g1398 624 Pfam ATP-dependent protease La (LON) substrate-binding domain 167 514 IPR003111 -
Glsi08g1398 624 SMART lon_5 167 515 IPR003111 -
Glsi08g1398 624 SUPERFAMILY PUA domain-like 167 514 IPR015947 -
Glsi08g1398 624 PANTHER CEREBLON 100 617 - -
Glsi08g1398 624 MobiDBLite consensus disorder prediction 316 336 - -
Glsi08g1398 624 ProSiteProfiles Lon N-terminal domain profile. 168 515 IPR003111 -
Glsi08g1398 624 FunFam ATP-dependent protease La domain-containing protein 148 276 - -
Glsi08g1398 624 ProSiteProfiles CULT domain profile. 516 623 IPR034750 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1398 08 10222870 10232758 Glsi08g1398 08 10222870 10232758 ECH