Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1397 ATGGGAAGTCAGAAGAGTGAGATTTATGGGTTGGAAATCTTCAATGTGATGATCATTGGCATTCGAATTGAAAATAATGCAGAAGTGCGGAACAAGCATGAGAGTATTGCCTCTGCCAGAAGTGGGGGGAACAGTATGGAGTGCAAGCGTGCATATAATAACAGCAGTGATAGGGGCAGGAGTATTGGCTCTTGCATGGGGGATGGCACAGCTAGGATGGATAGCAGGCCTATCTGTGCTCTTGAGTTTTTCTGGTATCTCCCTTTACACTTACAGTCTGTTGGCCGATTGTTACAGAACTCCGGATCCTCTCACCGGCACCAGAAATCATACTTACATGCAGGCTGTCAATGCCACTTTAGGGCCATACACAAATCGGGTTGCTTTCACAAAAGAGGCCATGACGCTACATGCAAGTATTCCAATAATCCCTACATGATGGGGTTTGGCATCCTCCAAATTTTCTTGTCCCAGATACCTAACTTTCACAAGCTAACTTGGCTCTCAACCCTCGCTGCTGTCACTTCTTTTGGCTATGCATTCATTGGAATTGGACTATCAGTTGCAGTCCTCATCGCAGGGAAAGGAAAGAGAACCGCTCTGACAGGGGTGGAGGTGGGAGCAGAACTATCTGAAGCAGATAAAGTTTGGAGAGTTTTCAGCGCACTGGGAGACATCGCGCTTGCTTGCTCATATGCTACAATTATTTTTGATATTGAAGACACATTAAGGTCATCAGCACCAGAAAACAAACAGATGAAACGGGCCAACTTGATAGGAATCTCAACGATGGTAATGATTTTCCTCGCTTGTGGTTGCTTTGGCTATGCTGCATTTGGCGACCAAACACCAGGCAACATCCTCACCGGCTTTGGGTTCTACGAGCCCTTCTGGTTGGTCGACTTGGGCAATTTATTTATTGTCATCCACCTTGTTGGAGCATTCCAGGTAATTGCTCAGCCAATTTATCGTATTGTTGAAATGGGTGCGAACATGTGGTGGCCAAAGTCAGAGTTCGTAAGCAAAGAGTACCCAGTGAGCATTGGGAGGATCAGATTCAATGTGAATTCGTTTAGGCTTATTTGGAGGACGATATTCGTGGTGGTGGTAACCATTCTAGCTATGGCTATGCCATTTTTCAATGAAATGCTTGCATTGCTTGGATCACTCGGATTCTGGCCCCTTGCAGTTTATATTCCAATAGAGATGCACATTGCCCAGAAACGGATTAAAAAGCTGTCATTCAGGTGGTTTGGGCTGCAACTATTGAGCTCTGCGTGCTTTCTTGTTTCACTGGCCGCAGCGTGTGGTGCCATTTATGGCATAAACAAGGGCCTCCACGACTATAAGCCTTTTATGTACAAACAGTAG 1371 0.4566 MGSQKSEIYGLEIFNVMIIGIRIENNAEVRNKHESIASARSGGNSMECKRAYNNSSDRGRSIGSCMGDGTARMDSRPICALEFFWYLPLHLQSVGRLLQNSGSSHRHQKSYLHAGCQCHFRAIHKSGCFHKRGHDATCKYSNNPYMMGFGILQIFLSQIPNFHKLTWLSTLAAVTSFGYAFIGIGLSVAVLIAGKGKRTALTGVEVGAELSEADKVWRVFSALGDIALACSYATIIFDIEDTLRSSAPENKQMKRANLIGISTMVMIFLACGCFGYAAFGDQTPGNILTGFGFYEPFWLVDLGNLFIVIHLVGAFQVIAQPIYRIVEMGANMWWPKSEFVSKEYPVSIGRIRFNVNSFRLIWRTIFVVVVTILAMAMPFFNEMLALLGSLGFWPLAVYIPIEMHIAQKRIKKLSFRWFGLQLLSSACFLVSLAAACGAIYGINKGLHDYKPFMYKQ 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1397 456 Pfam Transmembrane amino acid transporter protein 120 442 IPR013057 -
Glsi08g1397 456 PANTHER OS05G0424000 PROTEIN-RELATED 126 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1397 Glsi-ChrGlsi08 10214663 10222339 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1397 122 452 Organic Solute Cotransporters AT1G58360 53.614 4.43e-135 396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1397 08 10214663 10222339 Glsi08g1397 08 10214663 10222339 ECH