Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1393 ATGGGGTCTCACGATTCGCAGTCGAAGATCGTCTATGGCGAAGCTGGTTACATACTGGAAGACGTTCCTCACTTCTCCGACTATATTCCTAATCTTCCTACATACCCAAATCCGCTGCGATCTAATCCAGCTTATTCAGTTGTCAGGCAGTATTTTGTTGACGTGGATGACACCGTTCCTCAGAAGATTGTTGTTCACAGAAGTAGTCCAAGGGGTGTACATTTTCGACGTGCAGGACCCCGCCAAAAGGTATATTTTAAATCGGATGATGTGCATGCGTGCATTGTTACATGCGGTGGCCTGTGCCCTGGACTCAACACAGTCATAAGGGAAATTGTCTGTGGTCTTTCTCACATGTACGGTGTCAACAAAATCCTTGGTATAGATGGGGGTTATAGAGGTTTCTATTCCAAGAACACCATTACTTTAACACCCAAGGTGGTCAATGATATCCATAAGCGTGGGGGTACCATTCTTGGGACATCACGAGGAGGGCATGATACTGCCAAGATAGTTGACTGCATACAAGATCGTGGAATTAATCAGGTTTATATTATTGGAGGAGATGGAACTCAGAGAGGAGCAGCTGTAATATATGAGGAAGTTAGAAGGCGAGGTCTCAAAGTAATGATTGCTGGGATTCCTAAAACCATAGATAATGACATCCCGGTTATTGACAAGTCCTTTGGTTTTGATACTGCGGTTGAGGAGGCTCAACGTGCCATTAATGCAGCACACGTTGAAGCTGAAAGTTTTGAGAATGGAATTGGTGTTGTAAAGCTAATGGGACGCTACTGTGGTTTCATTGCAATGTACGCTACTCTTGCTAGCAGAGATGTGGACTGTTGCCTGATTCCAGAGTCACCCTTCTATCTTGAAGGAAAGGGTGGACTTTTTGAATTTATTGAAAAAAGGCTAAAAGAAAATGGACATATGGTTATAGTCATAGCCGAGGGAGCGGGACAAGATCTTCTTACAGAAAGCATGCAAGCAATGAACCTGAAGGATGCTTCTGGAAACAAACTACTCCAAGATGTTGGTCTTTGGATATCTCAGAAGATTAAGGATCATTTTGCAAGGCAAAATAAGATGGCCGTCACTCTGAAATATATAGATCCTACTTATATGATCCGGGCAATTCCAAGCAATGCATCAGACAATGTATACTGCACACTTCTTGCTCAGAGTGCAGTTCATGGGGCAATGGCAGGGTATACTGGATTCACATCTGGGCTGGTCAATGGCAGACAGACTTATATTCCATTCAATAGAATCATTGAGAGGCAGAACAAGGTTGTGATTACGGACAGGATGTGGGCAAGACTTCTTTCTTCAACCAACCAACCAAGCTTTTTGAATCGCCGAGATGTTAAAGAAGCCAAAAAAGAAGAAAAGCCTCTCACTCATTTGTCAGATAGGGACAATAGCAAAGCTGAACAACAATCAGGAAACTGA 1455 0.4323 MGSHDSQSKIVYGEAGYILEDVPHFSDYIPNLPTYPNPLRSNPAYSVVRQYFVDVDDTVPQKIVVHRSSPRGVHFRRAGPRQKVYFKSDDVHACIVTCGGLCPGLNTVIREIVCGLSHMYGVNKILGIDGGYRGFYSKNTITLTPKVVNDIHKRGGTILGTSRGGHDTAKIVDCIQDRGINQVYIIGGDGTQRGAAVIYEEVRRRGLKVMIAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESFENGIGVVKLMGRYCGFIAMYATLASRDVDCCLIPESPFYLEGKGGLFEFIEKRLKENGHMVIVIAEGAGQDLLTESMQAMNLKDASGNKLLQDVGLWISQKIKDHFARQNKMAVTLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAMAGYTGFTSGLVNGRQTYIPFNRIIERQNKVVITDRMWARLLSSTNQPSFLNRRDVKEAKKEEKPLTHLSDRDNSKAEQQSGN 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1393 484 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 22 452 IPR012004 GO:0003872|GO:0005524|GO:0006096
Glsi08g1393 484 MobiDBLite consensus disorder prediction 453 484 - -
Glsi08g1393 484 PRINTS ATP-dependent phosphofructokinase family signature 212 229 IPR022953 GO:0003872|GO:0006002|GO:0006096
Glsi08g1393 484 PRINTS ATP-dependent phosphofructokinase family signature 95 114 IPR022953 GO:0003872|GO:0006002|GO:0006096
Glsi08g1393 484 PRINTS ATP-dependent phosphofructokinase family signature 308 320 IPR022953 GO:0003872|GO:0006002|GO:0006096
Glsi08g1393 484 PRINTS ATP-dependent phosphofructokinase family signature 251 267 IPR022953 GO:0003872|GO:0006002|GO:0006096
Glsi08g1393 484 PRINTS ATP-dependent phosphofructokinase family signature 230 248 IPR022953 GO:0003872|GO:0006002|GO:0006096
Glsi08g1393 484 PRINTS ATP-dependent phosphofructokinase family signature 179 195 IPR022953 GO:0003872|GO:0006002|GO:0006096
Glsi08g1393 484 MobiDBLite consensus disorder prediction 454 476 - -
Glsi08g1393 484 SUPERFAMILY Phosphofructokinase 26 460 IPR035966 GO:0003872|GO:0006096
Glsi08g1393 484 Gene3D - 88 277 - -
Glsi08g1393 484 PIRSF ATP_PFK_TP0108 1 456 IPR012004 GO:0003872|GO:0005524|GO:0006096
Glsi08g1393 484 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 1 4 459 - -
Glsi08g1393 484 Pfam Phosphofructokinase 94 399 IPR000023 GO:0003872|GO:0006096
Glsi08g1393 484 FunFam ATP-dependent 6-phosphofructokinase 87 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1393 Glsi-ChrGlsi08 10160293 10166073 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1393 08 10160293 10166073 Glsi08g1393 08 10160293 10166073 ECH