Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1389 ATGAATTTCAAGCCAAAATCGAGGTTTACAAATATTCTCATTCATAGTCATTACTGTAATACTTTGGCCCTCGTTCTCATTGCTACTTGGTACATTTTTGTTGCTTTTTCTCAGTTCTCTATTGCAGCTATCAATGACACAGACTCCAAAAGTCAGTGGGAACCACTTGCTCCTACAAAAGAAGCCCAGGAATTTCATCTGTCTCAAACTTACCATGAAGGACTTCTCAAGTTACAAGCTAAAGAATATGAAAAGGCTCGCGAGCTGTTAGAATCTGTCCTCAAAGATCCTCTTATAGCTAATGCTCAAGTGGATAGCTGTGCTAGTGATGGTCATTTGTTGCAACTCAGATTTTTGGCATTGAAGAACCTAGCCTCCGTTTTTCTTCAGCAAGGTTCTGCTCATTATGAGAATGCTCTACACTGTTATCTTCAAGCAGTGGAAATTGACTCAAAAGATTCTGTTATCTGGAACCAGTTGGGAACATTGTCATGCTCAATGGGCTCACTGAGTATTTCACGGTGGGCATTTGAGCAAGGCCTCTTGTGTAGCCCTAACAACTGGAATTGCATGGAAAAACTTTTGGAAGTTCTTATTGCTATTGGCGATGAGGTTGCATGCCTCTCTGTGGCAGAATTGATTTTGAGGCATTGGCCATCACATTCTCGTGCTTTGCATGTAAAAAATACCATTGAAGAGACAGAACCATTGCCATTTGCTCCTAGAGGCATAGACAAGCTGGAACCTAAACATGTGCGGCTCAAATTTCCTGACAAGAGAAAAGCTACTAATGAAAACCTGGATGAGGATGTTGCATTTAAGAAGCTGAACCAGAACATAGAACTTCACCTTACAGAAGCTTCCTGGGCGGCTCTTGCTGATGCTCTGCTGGAAATCTTATTACCGTTGAATGGGAAAAGTTCCGAGACTGAACCTGAGAAAGCTAGCAAGTCTGGGGACATCAGATTAAGCATTCAATTATCTTGTTCAGAAGTTGGTATGAACTCTGTTGATAAAAAAGGGTCCAGTGGTGAAATTATTGCCTTTGGTGATGGTAACATAGAAAGGTCAAGTACCTTTAAAGAAAAAGAAGTCAATACCCAGGAAGAGCAACCACATGAGAGGAGAAGTTCTCGTCTGGAAAGGCTCAGGAGTCGTAAACCAGGGAAAGAAGAATCAGATTCTGCATGTGGCAAGGACCATGCCAGGGTTGTCATTCAATATCTAGAGCCTTTTATTGCTGGTGGATTGGGTGGTAGAGATTCTCTTGATACTACTACATCCTCCAATGTAGCAAACACTGAATCTAGTAACGTTTCTAGATTTGTAAGAGAGAGTTCGAAAAACTATGGTGCTTACCATGTGGCGCACTTGCTTTTAGAAGAGATTGCAATACAAAACCTTATATATCAGGATGCTTTTGTCAAGTTTCTAGAGTTGGAGAAGTTGACGAGGCATTGGGGAAAGGAAAGAACTGCTGAATGTAGCCTTTTTCTTGCTGAGCTGTATTATGACTTCGGATTATGCTTTCCACGTGGTTCTAAACAATCAAAATTCATGTCAGAGGCATCTTATCATCTCTGTAAGATCATTGAGTCTGTAGCTCTAGATTATCCTTTTCACTTGACTAATGACTTGAAGAACGAAGGTTGTTCTTTGGTTGATAGTTTCCAGAAAACCGGTAGATTATCAACAAATACTTTTACTGAAAGTAATTCAAGTTTAGACAGCTCCCTTCTAATGAAAAACAGTTCACTCTGGGTTAGATTCTTCTGGTTAAGTGGGAGATTGTCTAATTTTGAGAGCAACAAGACAAAAGCTTGCGAAGAATTGTGTTCATGCTTGTCACTTCTGGCAAAGAGGCAAGATATGAATAATTCTCAATGTTCAGTCTGCCGCCCACACTGCAAGGCTATAAAAGACCTTAGCATTGACAGAGTTCTCTATGAAATTAACATGTTAAAGGTCATTTTCTTGATGGAAAAGTCTGTCATTAAGATGGTTGAAAAAGAAATGTATTTGGAGTGTGTAACCTTGCTTTCTCCACTTCTATTCTCTACACAGGATGTTTACATTGATTCATTATCTTTGACCTTGGCAGATAAAAAAGATGAAAAGATAACATTGATTGAATTCATGGCTCTAGATGTTCTAATTGAAGCATGTCAGAAAATAAAGCCAATGGATGTGGAGATGTATTTAAATTGTCATCATAGAAAACTGCAAGTACTTATGGCAATGACAAGATTGAATGAATGTCTTACTTCATTTAAATCCTCCCATCAGACACTAGGCATAAACACCACTCCTAATTTTGATATGTATTCAAAGGAAAGTTCAAGCAAGCTCTGTAGTCACTTGGTGGCAGAAGAAGTTAAAGCACTCTTTGACTGTGTCTCACAAGTGAAGCAAGTTATTGATCATCGTGGAGAATCTAATAGCCTTACTAGTCCAATGAGCAACATTTGTCAAATTCAATCTCTGCTGTTATCAATCATGAGTTATTTTGCAAACATTCTTGTCTGCAACAAAGCCTCAGCAATAGTAATTTCTGACCAAGCAGAAAGCAGCTGTTTTGTTGATGCGGCCATCATCTTTTGCAAACTCCAGCATTTTAACCCAAATATACCTATTAAAACTCAGGTTGATTTAATTGTTGCAACACATGACTTGCTTGCTGAGTATGGACTTTGCTGTGCTGGTGAAGGCGGGAAAGGTGAGGAAGGAACATTTCTTAGATTTGCAATAAAACATCTCCTGGCCTTGGATATGAAGCTTAAATCCAGTTTTAATCCTGTAAAGAAAGAACCAGTGCAATGTGAGAAGGTATCCCAAAACAGTCTTGTTAATGTGTCTATAGAAGAGTCAAAATCATGTACATTAGATCTTCAGATGGACCAGGCCAAAATAGATGAAATTAGTTCCATGCAGAAGGATGATTTTGAAGGAATATTATCCAAGGGAATTTCAACTTGCAAAGTCCAAGAAAAAGACAGCAAGGAAGTAGAGGGTGAAAATCTGGGAGGGTCTGAGTCTGACAGTAAGCTCAACAGAGGTGAAATCTTGAGCAATCATTTGGTTGAATGTGAAAATGAACTTACTGAAGATGAAAGGGAGGAACTTGAGTCAAAAATTGACAATGCCTTAGATCAGTGCTTTTTCTGCTTGTATGGATTAAATCTAAGATCTGATTCATCTTATGAAGATGATATAGTGATGCACAAAAATACAAGCCGGGGAGATTATCAGACTAAGGAACAGTGTGCTGATGTTTTCAAGTATGTTCTTCCCTATGCAAAGGCATCTTCTAGAACTGGATTAGTTAAGCTGCGCAGAGTTTTAAGAGCTATAAGGAAGCACTTTCTGCAGCCACCAGAAGACGTCTTGGCTGGAAACCCAATAGATAAGTTCTTAGATGATCCTGATCTATGTGAAGATAATCTCTCAGATGAGGCTGGGTCAAATGGATTTCTTGAAACTATTTTGAAGATCATGTTTCCTGATACAGGAGGCCTCACACAGTATAACACGTCATTACTTGGGAGGTCTGAGCCATATTTGGAGGTCTACTGTAACTTGTATTATTTCCTAGCTCTGTCTGAGGAAATGAGTGCAACAGATAAATGGCCTGGCTTTGTCCTGACCAAGGAAGGGGAAGAATTTGTTGAACAAAATGCAAACCTCTTCAAATATGATTTAATGTACAATCCTCTGCGCTTTGAAAGTTGGCAGCGACTTGCAAATATTTATGATGAGGAAGTAGATTTGTTGCTAAATGACGGTAGCAAGCACATTAATGTAGCAGGATGGAGGAAGAATGCTACTTTACCAGAGAGAGTTGAAACAAGCCGAAGGAGGAGCAGACGGTGCCTTCTAATGAGTTTAGCTTTGGCAAAGACTTCTGCTCAGCAGTGTGAGATACATGAGTTACTGGCATTGGTATACTACGACAGCCTCCAGAATGTGGTTCCATTTTATGATCAGAGATCTATTTTGCCCTCGAAGGATGCAGCATGGATGATGTTCTGTGATAACTCAATGAAACATTTTAAGAAAGCCTTCATACTTAAGGAAGATTGGTTGCATGCATTTTACTTGGGCAAACTCAGCGAAAAGCTTGGATATTCTCATGAAACTGCATTATCATATTACAACAAAGCCATTGCTTTGAATATGTCAGCTGTAGATCCTGTCTACAGAATGCATGCCTCACGCTTGAAGCTACTTTTCAAGTGTGGAAAACAAAATTTGGAGATTTTAAAGGTTCTTTCAGCAAACTCCTTTAATCAGTCTTCAAAAGAAGTCGTCATGAGTATTCTTGGTGAAATGGATGGCTCATCAATAAGTACGAAGGAGAGATGTATTCAAGTCAATTCTGTGGAGATAAAGCATGAAGGATTGCTCAAATTGGATAAGGCATGGTCTATCCTTTACAATGATTGTATTTCTGCCCTTGAAACTTGTGTGGAGGGGGATCTCAAACATTACCATAAGGCCAGATACATGCTGGCTCAAGGGCTGTATAAAAGGGGTGAGAGTGGTGATGTAGAGAGGGCAAAAGATCAACTATCTTTCTGCTTTAAATCATCACGTTCTTCCTTTACTATAAATATGTGGGAAATTGATAGCATGGCCAAAAAAGGAAGGCGCAAAACTCCAGGTTCTTCTGGGAACAAAAAAGCCCTGGAGGTTAATCTACCAGAAAGTTCACGAAAATTCATTACTTGCATTCGCAAGTATGTGCTGTTTTATCTCAAACTACTGGAGGAGACTGGAGATAGATGTACTCTGGAGCGTGCATATATTTCTCTTCGGGCAGATAAGAGGTTTTCATTATGCATTGAAGATCTTGTACCTGTGGCCATCGGAAGGTATGTAAAGGCCCTGATTTCAACTATGCAACATTCTCACACTGCTATCTCTGGTACAGTAAGCAGTTCTGACCATGTGCTGGAGAGACTGTTTACTTTGTTCATGGAGCAAGGGAGCTTATGGCCAGAGATATGCAGCTTGCCTGAAATTAAGAGCTCAGACACATCTGAGAGTATCTTATATGGATATCTTCACGAACATATTGTGTCACTGGAGAAAAATGGAAAACTAGAAACTCTTGAAGCAATAAATGAGAAGATTCGGAAACGTTTTAAAAATCCGAAGTTGTCAAATAGTAATTGTGGAAAAGTTTGCAGGCATGCTTCTGTTGCATGGTGCCGATCCCTTGTATATAACTTGGCACATATCAGTCAATTATCTTGTCCATTCTCAAATGAGAATCTGGCGGATAATTGGACAGATGGTGGGACAGACAATAGCCAGTTGCTCTGTGTTGATCTGCACACACATGAATTATGGAGTACGGCTTTTGAAGATCCACTTCATTTGAAAGAACTTGAAACAAAATGGAGCCCTATTTTATCAAAAATAAAAAATACAGTGGTCAAGAAAGCCTCTGATGAAAATTTGGAGACTGCAAACACTTTGCTTAGAGCTTCCTACAATTTTTACCGTGAGAGTTCTTCTGTAATGCTTGCATCTGGCTTTAACCTTTATCTGATTCCATCTCAATTAGCAACAGAGGCACAGTTCCACCCCAGTATGAATGGGATTGAAGCGCTTGATCTGAGCATCCCGAGGAAGCTTCTCTTGTGGGCTTATGTGCTATTGTATGGTCGTTATGCAAATATCTCAGTTGTCGTAAAGCATTGTGAAGAAATTACAAAGTCTAAGATGAAAAGAGGAAGTGGAACTTCATCTTCATTTTCGAATTCTACTGTTGGCACCCCCACTCTTACAGGTAGCGGGAAAGATGGGGCAAATTCTGTTGGATGCATTGATATTGATCCCACTCATGTAACAACAGCGGGGTCTGGTTCTTTGTCTGGCAGCAGTACCACTAATTTTGTGAATTCACATCCTTCCTCCGATGAGGTTCAAAAGAATCTCTTTCCCCAATTGCATCATTGTAGCACCAACGTTGCAGAAAGGAGCAATTTGATGGCACATGAAGAAGATCCAGAGAATTTGACCTCATCTAAGTAG 6039 0.3971 MNFKPKSRFTNILIHSHYCNTLALVLIATWYIFVAFSQFSIAAINDTDSKSQWEPLAPTKEAQEFHLSQTYHEGLLKLQAKEYEKARELLESVLKDPLIANAQVDSCASDGHLLQLRFLALKNLASVFLQQGSAHYENALHCYLQAVEIDSKDSVIWNQLGTLSCSMGSLSISRWAFEQGLLCSPNNWNCMEKLLEVLIAIGDEVACLSVAELILRHWPSHSRALHVKNTIEETEPLPFAPRGIDKLEPKHVRLKFPDKRKATNENLDEDVAFKKLNQNIELHLTEASWAALADALLEILLPLNGKSSETEPEKASKSGDIRLSIQLSCSEVGMNSVDKKGSSGEIIAFGDGNIERSSTFKEKEVNTQEEQPHERRSSRLERLRSRKPGKEESDSACGKDHARVVIQYLEPFIAGGLGGRDSLDTTTSSNVANTESSNVSRFVRESSKNYGAYHVAHLLLEEIAIQNLIYQDAFVKFLELEKLTRHWGKERTAECSLFLAELYYDFGLCFPRGSKQSKFMSEASYHLCKIIESVALDYPFHLTNDLKNEGCSLVDSFQKTGRLSTNTFTESNSSLDSSLLMKNSSLWVRFFWLSGRLSNFESNKTKACEELCSCLSLLAKRQDMNNSQCSVCRPHCKAIKDLSIDRVLYEINMLKVIFLMEKSVIKMVEKEMYLECVTLLSPLLFSTQDVYIDSLSLTLADKKDEKITLIEFMALDVLIEACQKIKPMDVEMYLNCHHRKLQVLMAMTRLNECLTSFKSSHQTLGINTTPNFDMYSKESSSKLCSHLVAEEVKALFDCVSQVKQVIDHRGESNSLTSPMSNICQIQSLLLSIMSYFANILVCNKASAIVISDQAESSCFVDAAIIFCKLQHFNPNIPIKTQVDLIVATHDLLAEYGLCCAGEGGKGEEGTFLRFAIKHLLALDMKLKSSFNPVKKEPVQCEKVSQNSLVNVSIEESKSCTLDLQMDQAKIDEISSMQKDDFEGILSKGISTCKVQEKDSKEVEGENLGGSESDSKLNRGEILSNHLVECENELTEDEREELESKIDNALDQCFFCLYGLNLRSDSSYEDDIVMHKNTSRGDYQTKEQCADVFKYVLPYAKASSRTGLVKLRRVLRAIRKHFLQPPEDVLAGNPIDKFLDDPDLCEDNLSDEAGSNGFLETILKIMFPDTGGLTQYNTSLLGRSEPYLEVYCNLYYFLALSEEMSATDKWPGFVLTKEGEEFVEQNANLFKYDLMYNPLRFESWQRLANIYDEEVDLLLNDGSKHINVAGWRKNATLPERVETSRRRSRRCLLMSLALAKTSAQQCEIHELLALVYYDSLQNVVPFYDQRSILPSKDAAWMMFCDNSMKHFKKAFILKEDWLHAFYLGKLSEKLGYSHETALSYYNKAIALNMSAVDPVYRMHASRLKLLFKCGKQNLEILKVLSANSFNQSSKEVVMSILGEMDGSSISTKERCIQVNSVEIKHEGLLKLDKAWSILYNDCISALETCVEGDLKHYHKARYMLAQGLYKRGESGDVERAKDQLSFCFKSSRSSFTINMWEIDSMAKKGRRKTPGSSGNKKALEVNLPESSRKFITCIRKYVLFYLKLLEETGDRCTLERAYISLRADKRFSLCIEDLVPVAIGRYVKALISTMQHSHTAISGTVSSSDHVLERLFTLFMEQGSLWPEICSLPEIKSSDTSESILYGYLHEHIVSLEKNGKLETLEAINEKIRKRFKNPKLSNSNCGKVCRHASVAWCRSLVYNLAHISQLSCPFSNENLADNWTDGGTDNSQLLCVDLHTHELWSTAFEDPLHLKELETKWSPILSKIKNTVVKKASDENLETANTLLRASYNFYRESSSVMLASGFNLYLIPSQLATEAQFHPSMNGIEALDLSIPRKLLLWAYVLLYGRYANISVVVKHCEEITKSKMKRGSGTSSSFSNSTVGTPTLTGSGKDGANSVGCIDIDPTHVTTAGSGSLSGSSTTNFVNSHPSSDEVQKNLFPQLHHCSTNVAERSNLMAHEEDPENLTSSK 2012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1389 2012 Gene3D Tetratricopeptide repeat domain 38 230 IPR011990 GO:0005515
Glsi08g1389 2012 SUPERFAMILY TPR-like 70 206 IPR011990 GO:0005515
Glsi08g1389 2012 MobiDBLite consensus disorder prediction 358 398 - -
Glsi08g1389 2012 MobiDBLite consensus disorder prediction 1954 1975 - -
Glsi08g1389 2012 Coils Coil 76 96 - -
Glsi08g1389 2012 Coils Coil 1024 1051 - -
Glsi08g1389 2012 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 50 235 - -
Glsi08g1389 2012 PANTHER CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED 39 1995 IPR033053 GO:0006325
Glsi08g1389 2012 MobiDBLite consensus disorder prediction 1911 1933 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1389 08 10133997 10146740 Glsi08g1389 08 10133997 10146740 ECH