Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1373 ATGGCGTCATTTCGACGGACTTTGTCGCCGGCGTACAACGATCGGCAGTTCCAAAACGGTGTTGGAGCGTTCTCAGTTTCCTCTCCTCATCACAAGCTTGCTCCCAATGCTAAGTACCCGTCGCCATTGCTGGCGTTGTTTGCGTATGCCGTCAGATTGCGGAGGTTTCTTGCTGGGATTTTTGTGCGGCGGTATGCTCGAAAAGGGCAATGGAGAAGAGCGCTGTATAGGTGTTTGCTCTGTTTCTTCCTAGGTTTCTTGTGGGGTATGTTTCCTTTTGGTCGCGTTGCCGATGATATTCGCCGTCAGGATATCTCGTTTGAGATCAAACCGCCTCATGCGAATGCACAATTTGTCCCGGAGGATCGCGTTCTGAAGCATGACGAGGAGTTTGTGATCGATCCAGTGAGTTTGAGTGCCGATAAGCAGAATACAATCGATGAGGGGGTCGATTTTGTGCCCAGGAAGCAGTTGATTGTGGTGACTCCCACATATAGTCGGGCGCTTCAGTCTTATTTCCTGAACAGGTTGGCTCACGTGCTCAGACTGGTGCCTCCGCCGATTCTGTGGATTGTGGTGGAAATGAATTCAGCTTCTATGGAGACTGCTGAAATACTGAGGAAAACGGGTGTGATGTATAGGCATTTGGTCTGCACTAAGAACTCAACAACTGTGAAGGACAGAGGAGTGCATCAAAGGAATACAGCGTTGGAGCACATTGAGCACCATAGACTTGATGGAATTGTCTACTTCGCAGACGATGATAATATATATTCTCTCGAGTTGTTTGAGACCTTGCGAGACATAAGCCGCTTTGGTACATGGCCTGTTGCCATGCTTGCACAAAGCAAAAACAAGGCCATCTTGGAGGGTCCAGTATGCAATGCAAGTCAAGTGATTGGGTGGCATACAAATGAAAAAAGTAAAAGACTTCGTAGGTTTCATGTTGATATGTCTGGATTTGCGTTTAATAGCACAATCTTGTGGGATCCTAAAAGATGGCGGCGCCCTACTTCAAATCCTATTCGACAGTTGGACACAGTGAAAGAGGGTTTTCAAGAGACCACCTTTATAGAACAATTGGTGGAAGATGAGAGTCAAATGGAAGGTTCACCTTCTGGTTGTTCCAAAATAATGAATTGGCATCTTCATTTGAATGCTCATAATATAGTTTATCCTAAGGGTTGGCTGCTTCAGAAAAACCTAGATGTTGTCATCCCCATCAATTAA 1230 0.461 MASFRRTLSPAYNDRQFQNGVGAFSVSSPHHKLAPNAKYPSPLLALFAYAVRLRRFLAGIFVRRYARKGQWRRALYRCLLCFFLGFLWGMFPFGRVADDIRRQDISFEIKPPHANAQFVPEDRVLKHDEEFVIDPVSLSADKQNTIDEGVDFVPRKQLIVVTPTYSRALQSYFLNRLAHVLRLVPPPILWIVVEMNSASMETAEILRKTGVMYRHLVCTKNSTTVKDRGVHQRNTALEHIEHHRLDGIVYFADDDNIYSLELFETLRDISRFGTWPVAMLAQSKNKAILEGPVCNASQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPTSNPIRQLDTVKEGFQETTFIEQLVEDESQMEGSPSGCSKIMNWHLHLNAHNIVYPKGWLLQKNLDVVIPIN 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1373 409 CDD GlcAT-I 158 387 IPR005027 GO:0015018|GO:0016020
Glsi08g1373 409 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 70 404 IPR005027 GO:0015018|GO:0016020
Glsi08g1373 409 SUPERFAMILY Nucleotide-diphospho-sugar transferases 157 401 IPR029044 -
Glsi08g1373 409 FunFam Glycosyltransferases 157 399 - -
Glsi08g1373 409 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 157 403 IPR029044 -
Glsi08g1373 409 Pfam Glycosyltransferase family 43 177 385 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1373 Glsi-ChrGlsi08 10029157 10031549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1373 1 408 Glycosyltransferase AT1G27600 62.621 0.0 517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1373 08 10029157 10031549 Glsi08g1373 08 10029157 10031549 ECH