Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1372 ATGGCCGCATCTTCCAGAGACCAAGCACTCTCTTTCCTCGCCGCTGCCAACAACCATGGCGACTTGGCCGTCAAAATATCGTCTTTGAAACAAGCCAAAGATGTTCTGTTGTCAATGGAGCCATCCTTGGCCGCCGAGCTTTTCTCCTACTTGGTCGAGCTTCAGTCCTCCCCCGAAACCCTCGTTCGAAAATTGCTCATCGAGGTAATTGAAGAGATTGGTTTAAAAGCAGCAGAGCATTCTTCTACACTGATGTCTGTGCTAGTAACATTCTTACAAGATGGTGACACAATTGTTAGAAAGCAATCTATTGTTAGTGGCACAAATATCTTCCGCAGTGTTTTGGAGGAGATGACAGTGCAGTATCAACAGTATGGTAAAGTTGAGAGGTGGTTAGAGGAGATTTGGATGTGGATGCTTAAGTTCAAGGATGCTGTATTTGGGATTGCTCTGGAGCCTGGTTCTGTTGGAACAAAGCTGCTGGCACTGAAATTCTTGGAAACAATAGTCTTAATTTTTTCATCTGATATCAATGATCCTGAGAAGTCAGTTTCTGAAGGAGGTAGAAATGCATTTAACATCTCATGGTTGGAGGGTAGTCACCCTGTTCTTGATCCAGTGATGCTCATGTCAGAAGCAAATAGGACAATTGGCATTCTATTAAATTTATTGCAATCATCTGGTAGTCTCCCTGGTTGCTTGACAATTACTGTTGTCAATTGTCTTGCGGCAATAGCAAGGAAAAGGCCACAGCACTGTAATATTGTTCTTTCTGCATTGCTCGAGTTTGATCCAAATTTTCAAACAGTAAAAGGATGTCATGTTGCCAGTATCCATTACTCCTTAAGAACAGCATTTTTGGGATTTCTAAGATGCACTCATTTACCAATACTAGAGTCAAGGGAAAGATTGGTAAAGAGCCTGCGATCTATGAATGCAGGGGATGCCGCAGATCAAGTTATTCGGCAAGTGGACAAATTGATTAAAAATGGTGATCGCTCTTTCCGTGATGCTCGAGTTAGCAAGGATGATCATTTATCAACTCAGACACCTGATTCTGGGGAGTTATCTAGAAAAAGATCTGTGCCTCTGGATAATGAGCAATTGGTCAATGGTCATGATGACATCTTTAAGCGAATTCGTTCTGGTCCTGACCCACACTCTCCTTTGCCAGTTCAAATAATTGATTCTGGGCAGGCTCGTAACTCTGCTAATGGAATATCCTCTAATGTTCCTATCCTGGACAGTGAACTAACTGCTGTGGAGCAAATGATTGCCATGATTGGTGCATTGCTTGCAGAAGGAGAAAGAGGTGCTGAATCTCTTGAAATCCTTATTTCAAAGATCCATCCTGATCTGTTGGCTGATATTGTCATTACAAATATGAGGCACTTGCCTAAGACAAGCCCATCATTAACAAGGGCTGGGAGTTCACCAGTAACTCAACAAGTAGATACCCGAGGTGGTCAATTGCAAGTTGTAGCAGCATCTTCTCCAATAAATTCTGTGCAATCCTCGGCTATTACTGCCCAAGTTCCATTGCCCTCAGCTTCTACCATTGCCACTAGTGCTTCACTGTCTGACATCTCTAATGTCAATAATCAGCCTGCTGATTCTAAACGTGATCCACGCAGGGATCCTCGTCGCCTGGATCCAAGGCGTGTTGCAGTAACTGCTGGAGGAACAGCTGTATCAGTTATGGAAGACACTGATGCTGAGAAATTGGAGCATGATGATACAATGTCTCTTAGTAAGCCTGTTTCACATCCTGCTGTGACCACTAATGACAATACTTCAGCATCTCTAACAACCAAAATAAAAAGTGAAGATATGATCTCTGATGGTCCACCAGTTTCAGGATCTGAGGAACCAATTAGCAAAACGGAAGTTCAAGAGAAACCTGTAGATATTGATTGGAATCCAGAAGAAAATGCTTCTTTGGATCCCTCACTCTCTACTGTTGGTATAATGGATGAGGATCTGAGTACAGTGAATCTATCAGATGTCACTGTGGCAAAAAGGACAGATTCATTATCTATACTGGAATTTGATCAGTTTTCTCCTGATGTTACAATTGCATCTACGTCAGAAGATACCTGTTTGGAATTACCACAGCTTCCACCATATGTTGAACTATCCAGAGATCAGGAAAGTAACATCAAACATATGGCGATTAAGCATATTATTGAGTCATACAAGCATTTGCATGGGACAGATTGTCAGCAGTTTTGTATGCCATTACTTTCTCGACTGGTAGCTCAGATTGATGATGATAAAGAGTTTATTTTGATTCTGCAAAAATACATCCTGAATGACCAGTGGCGAAAGGGGCATGAACTTGTCTTGCATGTTTTGTACCATCTGCACTCCCGCACTATGTTGGAACCAATTGTGGACTCTTCATCTACTGCTGCTTTGTATGAAAATTTCCTCTTGGGAGTGGCCAAATCTCTGTTGGAGTTTTTTCCAGCTTCAGACAAGTCTTTTAGTAGACTTCTAGGTGAAGTCCCACTTTTGCCAGAATCTGCCTTGAAGGTTTTGAATGATCTTTGCTATTCTAGTGTTATTGATCATCATGGAAAAGTTGTCGGTGACATTGAGCGTGTAACTCAAGGCCTTGGTGCCATCTGGAGTTTAATACTGGGGCGTCCTCAGTATCGGCAAGGCTGCTTAGATATAGCATTAAAGTGTGCAGTTCATGCGCAGGATGAGATTCGAGCAAAAGCTATTCGGCTGGTGGCAAACAAACTCTATCAGCTTAGCTACATATCAGAAGATGTTGAACAATTTGCAAAAAAAATGCTTCTGTCTGCTGTAGATCATGAAGTCCTAGATCCAGGTCTTTCTCAATCTGATCCTGCTGAGCAAAGAGCTAAAGAAGAGGTTGAAATTCAGGGAACACCAGGTCCTTCACAAGTTTCAGAATCCACAGCTTCTGAAAATGACCCCACTGGAATTGCTAAACCAATGGTTCATAGTGTTCCATCTGTGTCATTCTCTGAAGCTCAACGTCTCATTTCTTTGTTTTTTGCTTTATGCACCAAGAAACCCAGTCTTCTTCAGATTATATTTAATGTCTATGGGCAAGCCCCGAAAACTGTAAAGCAGGCCATTCATCGTCACATTCCTATTCTTGTAAGGGCTTTAGGACAATCATATTCTAAAATGCTCCATATCATATCTGATCCACCACAAGGAAGTGAAAATCTATTGACACTGGTGCTACAAATATTGACTCAAGAGACAACACCATCTTCTGATCTAATAGCTACTGTTAAGCGTTTATATGAAACAAAATTAAGGGATGTTACAATTCTCGTTCCTTTGCTTTCATCACTCTCCAAAAATGAGGTTTTACCAATATTCCCTCGGCTTGTTGACCTTCCATTGGAAAAGTTCCAAATGGCACTTGCTCACATACTACAGGGTTCAGCTCATACGGGTCCTGCTTTGACACCTGTAGAAGTGTTGGTTGCAATCCATGGAATTGTTCCTGAGAAAGATGGCATCGCACTTAAGAAGATAACTGATGCTTGCACTGCTTGTTTCGAGCAACGTACAGTGTTCACACAGCAGGTTCTGGCAAAAGCATTAAACCAGATGGTTGATCAAACTCCTTTGCCTCTACTTTTCATGAGAACAGTTATTCAGGCAATTGATGCTTTTCCAGCACTGGTTGATTTTGTTATGGAGATACTATCGAAACTTGTGAATAAACAGGTGTGGCGAATGCCAAAACTTTGGGTTGGTTTCTTAAAATGTGTATATCAGACTCAGCCACATTCTTTTCCTGTATTATTGCAGTTGCCACCTACGCAACTAGAAAGTGCTCTCAACAAACATGCCAATCTCCGAGGCCCCCTTGCTTCTTTCGCCAATCAAAACACTGTAAAATCTTCACTACCTAGATCATCATTAGCTGTTCTTGGTCTTGCAAATGAAACACATATGCAGCAACATTTGTCAACTTCGTTGCACCCTTCTGATACAAGTTCAGTTCATGGAGCAACTCTGACATGA 4020 0.4174 MAASSRDQALSFLAAANNHGDLAVKISSLKQAKDVLLSMEPSLAAELFSYLVELQSSPETLVRKLLIEVIEEIGLKAAEHSSTLMSVLVTFLQDGDTIVRKQSIVSGTNIFRSVLEEMTVQYQQYGKVERWLEEIWMWMLKFKDAVFGIALEPGSVGTKLLALKFLETIVLIFSSDINDPEKSVSEGGRNAFNISWLEGSHPVLDPVMLMSEANRTIGILLNLLQSSGSLPGCLTITVVNCLAAIARKRPQHCNIVLSALLEFDPNFQTVKGCHVASIHYSLRTAFLGFLRCTHLPILESRERLVKSLRSMNAGDAADQVIRQVDKLIKNGDRSFRDARVSKDDHLSTQTPDSGELSRKRSVPLDNEQLVNGHDDIFKRIRSGPDPHSPLPVQIIDSGQARNSANGISSNVPILDSELTAVEQMIAMIGALLAEGERGAESLEILISKIHPDLLADIVITNMRHLPKTSPSLTRAGSSPVTQQVDTRGGQLQVVAASSPINSVQSSAITAQVPLPSASTIATSASLSDISNVNNQPADSKRDPRRDPRRLDPRRVAVTAGGTAVSVMEDTDAEKLEHDDTMSLSKPVSHPAVTTNDNTSASLTTKIKSEDMISDGPPVSGSEEPISKTEVQEKPVDIDWNPEENASLDPSLSTVGIMDEDLSTVNLSDVTVAKRTDSLSILEFDQFSPDVTIASTSEDTCLELPQLPPYVELSRDQESNIKHMAIKHIIESYKHLHGTDCQQFCMPLLSRLVAQIDDDKEFILILQKYILNDQWRKGHELVLHVLYHLHSRTMLEPIVDSSSTAALYENFLLGVAKSLLEFFPASDKSFSRLLGEVPLLPESALKVLNDLCYSSVIDHHGKVVGDIERVTQGLGAIWSLILGRPQYRQGCLDIALKCAVHAQDEIRAKAIRLVANKLYQLSYISEDVEQFAKKMLLSAVDHEVLDPGLSQSDPAEQRAKEEVEIQGTPGPSQVSESTASENDPTGIAKPMVHSVPSVSFSEAQRLISLFFALCTKKPSLLQIIFNVYGQAPKTVKQAIHRHIPILVRALGQSYSKMLHIISDPPQGSENLLTLVLQILTQETTPSSDLIATVKRLYETKLRDVTILVPLLSSLSKNEVLPIFPRLVDLPLEKFQMALAHILQGSAHTGPALTPVEVLVAIHGIVPEKDGIALKKITDACTACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAIDAFPALVDFVMEILSKLVNKQVWRMPKLWVGFLKCVYQTQPHSFPVLLQLPPTQLESALNKHANLRGPLASFANQNTVKSSLPRSSLAVLGLANETHMQQHLSTSLHPSDTSSVHGATLT 1339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1372 1339 MobiDBLite consensus disorder prediction 947 987 - -
Glsi08g1372 1339 Pfam Symplekin tight junction protein C terminal 1102 1280 IPR022075 -
Glsi08g1372 1339 SUPERFAMILY ARM repeat 18 1237 IPR016024 -
Glsi08g1372 1339 Pfam Symplekin/PTA1 N-terminal 96 318 IPR032460 -
Glsi08g1372 1339 MobiDBLite consensus disorder prediction 538 553 - -
Glsi08g1372 1339 Gene3D - 1 339 IPR011989 -
Glsi08g1372 1339 MobiDBLite consensus disorder prediction 967 983 - -
Glsi08g1372 1339 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1337 - -
Glsi08g1372 1339 MobiDBLite consensus disorder prediction 610 632 - -
Glsi08g1372 1339 MobiDBLite consensus disorder prediction 338 364 - -
Glsi08g1372 1339 MobiDBLite consensus disorder prediction 1319 1339 - -
Glsi08g1372 1339 MobiDBLite consensus disorder prediction 528 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1372 Glsi-ChrGlsi08 10000192 10027191 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1372 08 10000192 10027191 Glsi08g1372 08 10000192 10027191 ECH