Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1371 ATGGCTGTTCCAACAAGTTTCTCGGGGGCCAAATTGGAGGCTTTGTTGCTGAAGTCGTCTTCCTCTTCATCAGCATCATCGTCAAGGGCCTCCACTGCTACCCATTTATCTGTTTTTGGAAAACCCATAAAAAATAGAAGGACCCTGATTCAGAGACGAGTAATTAACTGCGAGGCTGCTGCTTCTGATGTCGTCGTTAAGACTGATGATCCAAGTAATGGCAAAAGCATCTCCGCTCTTGAGCAGCTCAAGACTTCTGCAGCTGACAGATATACAAAGGAAAGGAGTAGCATTGTAGTCATCGGGCTTAGTGTGCATACTACACCCGTTGAAATGCGTGAAAAACTTGCCATTCCAGAAGCAGAATGGCCTCGAGCGATTGGAGAGCTGTGTAGTTTGAATCACATTGAAGAAGCAGCTGTTCTTAGCACCTGCAACAGAATGGAGATATATGTTGTTGCTTTGTCCCAGCACCGTGGTGTCAAAGAGGTCACTGAATGGATGTCAAAGACTAGCGGGGTCCCTGTTTCAGAGCTTTGCGAGCACCAATTTTTGCTTTACAACAAAGATGCTACACAACATCTTTTTGAAGTGTCCGCCGGTCTTGACTCTCTTGTATTGGGAGAAGGCCAAATCCTTGCTCAAGTTAAGCAAGTTGTCAAAGCTGGACAAGGAATTAACGGCTTCGGGAGAAACATTAGCGGGCTATTCAAGCACGCTATTACTGTGGGGAAGAGGGTTAGAACTGAAACTAATATTGCCGCTGGGGCAGTTTCTGTAAGCTCTGCAGCTGTTGAATTGGCATTGATGAAGCTACCTGAAGCCTCACATAATAATGCTAGGATGTTGGTTATTGGAGCTGGCAAGATGGGAAAGCTTGTGATCAAACATTTGGTGGCAAAAGGTTGCACAAAGATGGTGGTTGTTAATAGAAGTGAGGAGAGAGTTGCAGCTATCCGTGACGAGCTGAAGGACATTGAGATCATCTATAAACCCCTATCAGAAATGCTCACCTGTGCTGGTGAAGCAGATGTAATTTTCACCAGCACAGCATCGGAAAACCCGTTATTTTTAAAATATCATGTTAAAGACCTTCCTCCTGCAGGTCAAGATGTTGGAGGCTATCGTCTATTTGTTGACATCTCTGTACCTCGGAATGTGGGTTCATGCGTCTCTGATGTTGATTATGTAAGAGTTTACAATGTTGATGACCTTAAAGAGGTTGTAGCTGCTAATAAAGAGGACCGGCTTAGAAAAGCAATGGAAGCACAGGCAATTATCGCTGAAGAATCAAAACAATTTGAAGCTTGGAGAGACTCTCTGGAAACTGTTCCTACCATCAAGAAATTGAGGGCTTATGCTGAAAGAATCAGGGTGGCTGAGCTTGAGAAATGCTTAGATAAGATGGGCGATGATATCTCAAAGAAGACGAGGAGAGCTGTGGATGACCTTAGCCGGGGTATAGTGAATAAGATGCTTCACGGACCAATGCAACACCTGAGGTGTGATGGGAGTGACAGCCGGAGTCTAAGTGAAACCCTTGAGAACATGCATGCTTTGAATAGAATGTTCAGCCTTGAGACTGAAATATCTGTTTTGGAGCAGAAGGTTCGAGCCAAGGTGGAACAAAACCAGAAGTAA 1641 0.4461 MAVPTSFSGAKLEALLLKSSSSSSASSSRASTATHLSVFGKPIKNRRTLIQRRVINCEAAASDVVVKTDDPSNGKSISALEQLKTSAADRYTKERSSIVVIGLSVHTTPVEMREKLAIPEAEWPRAIGELCSLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGVPVSELCEHQFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKAGQGINGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPEASHNNARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAIRDELKDIEIIYKPLSEMLTCAGEADVIFTSTASENPLFLKYHVKDLPPAGQDVGGYRLFVDISVPRNVGSCVSDVDYVRVYNVDDLKEVVAANKEDRLRKAMEAQAIIAEESKQFEAWRDSLETVPTIKKLRAYAERIRVAELEKCLDKMGDDISKKTRRAVDDLSRGIVNKMLHGPMQHLRCDGSDSRSLSETLENMHALNRMFSLETEISVLEQKVRAKVEQNQK 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1371 546 SUPERFAMILY Glutamyl tRNA-reductase dimerization domain 420 505 IPR036453 GO:0008883|GO:0033014|GO:0050661
Glsi08g1371 546 NCBIfam glutamyl-tRNA reductase 98 507 IPR000343 GO:0008883|GO:0033014|GO:0050661
Glsi08g1371 546 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 256 416 IPR036291 -
Glsi08g1371 546 Hamap Glutamyl-tRNA reductase [hemA]. 97 524 IPR000343 GO:0008883|GO:0033014|GO:0050661
Glsi08g1371 546 Gene3D - 96 256 IPR036343 GO:0008883|GO:0033014|GO:0050661
Glsi08g1371 546 FunFam Glutamyl-tRNA reductase 97 256 - -
Glsi08g1371 546 SUPERFAMILY Glutamyl tRNA-reductase catalytic, N-terminal domain 97 253 IPR036343 GO:0008883|GO:0033014|GO:0050661
Glsi08g1371 546 Gene3D - 257 409 - -
Glsi08g1371 546 PANTHER GLUTAMYL-TRNA REDUCTASE 1, CHLOROPLASTIC 5 543 - -
Glsi08g1371 546 CDD NAD_bind_Glutamyl_tRNA_reduct 98 420 - -
Glsi08g1371 546 Pfam Glutamyl-tRNAGlu reductase, dimerisation domain 422 526 IPR015896 GO:0008883|GO:0033014|GO:0050661
Glsi08g1371 546 Coils Coil 309 329 - -
Glsi08g1371 546 Pfam Shikimate / quinate 5-dehydrogenase 266 408 IPR006151 -
Glsi08g1371 546 ProSitePatterns Glutamyl-tRNA reductase signature. 194 217 IPR018214 GO:0008883
Glsi08g1371 546 Pfam Glutamyl-tRNAGlu reductase, N-terminal domain 101 251 IPR015895 GO:0008883|GO:0033014|GO:0050661
Glsi08g1371 546 FunFam Glutamyl-tRNA reductase 256 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1371 Glsi-ChrGlsi08 9992178 9994797 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1371 08 9992178 9994797 Glsi08g1371 08 9992178 9994797 ECH