Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1361 ATGGCCTCCATCGAAACAGAGCACACAGCCGGTCAATCCTCCCTGACAGAAGAGTACGATGACGACGTCGTATCACCGATCGAGGAGGTTCGTCTCACCGTATCCAACGACGACGACCCGACCCTACCTGTATGGACCTTCCGCATGTGGTTCCTGGGTCTCCTTTCTGTGGTGCTCCTCTCGTTCCTGAACACTTTCTTCTCTTACAGGACTGAGCCGCTGGTGATCTCGATGATATCAGTTCAGGTGGCTACGCTTCCGATTGGCAAGTTCATGGCCAGGGTGCTCCCGAGGACAAGGTTTCGGATCATTGGGTTCGGAGAGAGGGAGTTCTCACTCAACCCAGGTCCGTTCAACGTGAAGGAGCACGTGCTTATTTCCATATTCGCCAATGCTGGTTCCGCCTTTGGGAGTGGTGCCGCTTATGCTATTAGTATTGTGGATATTATCAGGGCTTTTTATGGTAGAAAGATTAGTTTCATAGCTAGTTGGATTCTCGTCATCACAACACAGGTATTGGGCTATGGATGGGCGGGAATACTAAGGAAGTACGTCGTAGATCCGGCGCAAATGTGGTGGCCTTCTAGTCTAGTGCAAGTCTCATTGTTCAGGGCTTTACATGAAAGAGACGACAGCAGGATGTCTCGAGGGAAATTCTTTTTAATTGCACTTATTTGCAGCTTCTGCTGGTATATAGTCCCAGGCTATCTTTTTCCTACTTTGTCAGCTATTTCATGGGTATGCTGGGTTTTTCCCAACTCAGTGACAGCCCAACAGATTGGATCAGGCATGCATGGACTTGGTTTGGGTGCCTTTTCCCTTGACTGGTCTACTATAGCTTCGTTCCTTGGCAATCCACTCGTCAGCCCATTCTTTGCCATAGCTAATGTTACTGTGGGCTACATCCTAGTAATTTACGTGATGATGCCAACAGTCTATTGGGGAATGAATCTATATAATGCCAAGACATTCCCCATATTCTCTTCACATCTATTCAATTCCCAAGGTCAGGTATACAATGTGACGGCCATTGTGAACGACAAGTTTGAGATAGATTTGCAGGAATACGAGAAACAAGGTCGTGTGAACCTCAGTGTATTCTTTTCTATGACCTACGGCATTGGTTTTGCGGCAATTGTCTCTACACTCTCTCATGTCGCCTTATTTAATGGGAGGGAGATATATCAACAAATCAAGGCTTCCCGTACTGGTAAGGAAGACATTCACACAAGACTGATGAAGAAGTACAAGGACATACCTAACTGGTGGTTTTATGTGATGCTTGTGGCTTCAATTCTACTTGGACTTGCCCTCTGTATTTTCATGAAAGATCAGATACAAATGCCTTGGTGGGGACTCATATTCGCAACTGGGTTGGCATTAATATTTACTCTTCCCATTAGCATCATAACGGCCACGACTAATCAGTCTCCAGGATTGAATGTCATTACAGAGTATATCATGGGCGTGATCTTACCAGGCAAACCAATAGCCAACGTCTGCTTCAAGACCTATGGCTACATAAGTATGACACAGGCTATTTCCTTTCTAAGTGATTTCAAGCTAGGACATTACATGAAGGTCCCGCCAAGATCAATGTTCATAGTTCAGACAATAGGGACTCTAATAGCTGGAACCATCAATATTGGCGTCGCATGGTGGCTGCTGAATTCAATTGAGAACATATGCCATGATGAACTACTGCCTCCAAACAGTCCATGGACTTGCCCTGGTGACAGGGTTTTCTTTGATGCATCCGTGATCTGGGGTTTGGTTGGTCCCAGACGAATTTTCGGTACTCTTGGGAATTACTCAGCACTCAATTGGTTCTTCCTTGTTGGTGCATTGGGACCATTAGTTGTATGGCTACTCCAGAAAGCCTTCCCCAAACAGAGATGGATATCCTACATTCACCTTCCTGTGCTTCTTGGATCAACCGCAAGCATGCCACCAGCTACCACGGTGAACTTCAATTCTTGGATTATTATTGGAACAATCTTTAATTACTTCATCTTCAGATATCATAAGAAGTGGTGGCAAAGGTACAATTATGTTCTATCAGCAGCGTTAGATGCTGGATTGGCTTTCATGGGGGTACTTCTCTATTTTACCATTACCATGGAGAACAGAAGCATATCTTGGTGGGGCGCAGATGGCGAGCACTGCGACCTGGCCACATGTCCAACAGCCAAAGGTATAGTTATTGACGGCTGCCCTGTGCATTGA 2226 0.4578 MASIETEHTAGQSSLTEEYDDDVVSPIEEVRLTVSNDDDPTLPVWTFRMWFLGLLSVVLLSFLNTFFSYRTEPLVISMISVQVATLPIGKFMARVLPRTRFRIIGFGEREFSLNPGPFNVKEHVLISIFANAGSAFGSGAAYAISIVDIIRAFYGRKISFIASWILVITTQVLGYGWAGILRKYVVDPAQMWWPSSLVQVSLFRALHERDDSRMSRGKFFLIALICSFCWYIVPGYLFPTLSAISWVCWVFPNSVTAQQIGSGMHGLGLGAFSLDWSTIASFLGNPLVSPFFAIANVTVGYILVIYVMMPTVYWGMNLYNAKTFPIFSSHLFNSQGQVYNVTAIVNDKFEIDLQEYEKQGRVNLSVFFSMTYGIGFAAIVSTLSHVALFNGREIYQQIKASRTGKEDIHTRLMKKYKDIPNWWFYVMLVASILLGLALCIFMKDQIQMPWWGLIFATGLALIFTLPISIITATTNQSPGLNVITEYIMGVILPGKPIANVCFKTYGYISMTQAISFLSDFKLGHYMKVPPRSMFIVQTIGTLIAGTINIGVAWWLLNSIENICHDELLPPNSPWTCPGDRVFFDASVIWGLVGPRRIFGTLGNYSALNWFFLVGALGPLVVWLLQKAFPKQRWISYIHLPVLLGSTASMPPATTVNFNSWIIIGTIFNYFIFRYHKKWWQRYNYVLSAALDAGLAFMGVLLYFTITMENRSISWWGADGEHCDLATCPTAKGIVIDGCPVH 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1361 741 PANTHER ISP4 LIKE PROTEIN 17 740 IPR004648 GO:0055085
Glsi08g1361 741 Pfam OPT oligopeptide transporter protein 45 704 IPR004813 GO:0035673
Glsi08g1361 741 NCBIfam OPT family oligopeptide transporter 28 704 IPR004813 GO:0035673
Glsi08g1361 741 NCBIfam small oligopeptide transporter, OPT family 25 709 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1361 Glsi-ChrGlsi08 9916085 9920006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1361 17 741 Organic Solute Cotransporters AT5G64410 73.931 0.0 1180
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1361 08 9916085 9920006 Glsi08g1361 08 9916085 9920006 ECH