Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1316 ATGTTGCTCCTACCTCGTGCTGCACCCATCTCGGTTGGTGTGCGGATTGCCCAGTCTGAAAGTGTCATTGTCCTGTTCTCCGCTGTATCCGCCACCGTGCTTCGCAGAGCACTGTATTCCACCACTCGTGTGGGTCTATATGATGTGCTCAAGCATAAATGGACCGATCCGAAGATGGGTAAAATGCCCCTGATTCGCAAGATAGCGGCGGGGCTAATCGCTGCGGTGGCGTCGAACCCGGTGGATGTGATCAAGACGAAGGTGATGAACGTGAAGGCGGAGCCAGAGGCGACCCCACCATACAATGGGGCCTTAGATTGTGTACTGAAGACAGTGAGGTCTGACGGGCCTATGACTCTAGAGAAGGGATTTGTTACTACAATTTCAAGACAGGTACATTTTACCGTGATGCCGTTTGTGCCCCTTGAATAA 432 0.5231 MLLLPRAAPISVGVRIAQSESVIVLFSAVSATVLRRALYSTTRVGLYDVLKHKWTDPKMGKMPLIRKIAAGLIAAVASNPVDVIKTKVMNVKAEPEATPPYNGALDCVLKTVRSDGPMTLEKGFVTTISRQVHFTVMPFVPLE 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1316 143 ProSiteProfiles Solute carrier (Solcar) repeat profile. 62 143 IPR018108 -
Glsi08g1316 143 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 66 143 - -
Glsi08g1316 143 SUPERFAMILY Mitochondrial carrier 11 140 IPR023395 -
Glsi08g1316 143 Gene3D Mitochondrial carrier domain 5 143 IPR023395 -
Glsi08g1316 143 Pfam Mitochondrial carrier protein 69 140 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1316 Glsi-ChrGlsi08 9536204 9536964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1316 15 143 Miscellaneous Gene Families AT5G09470 38.806 6.75e-20 82.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1316 08 9536204 9536964 Glsi08g1316 08 9536204 9536964 ECH