Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1315 ATGACTAACAAAAATGCGGAAGTGTCTCAGGGAGACGCCGGTGCTTCTCTACCCCCTCCTCAGGTTGGGCCACCAGATCACCTGCGTTCGCGTGGCAGCAATGGCAATACGGTTTTTAAGAGTGGGTCACTCTTCTTATCTTCAAAAGGAATTGGATGGACGTCCTGGAAGAAAAGATGGTTTATTTTAACACGCACTTCACTGGTGTTCTTCAGAAGTGATCCAAGTGCTGTTCCCCAGAAAGGGAGTGAAGTGAATTTAACCCTTGGTGGCATTGACCTCAACAATTCAGGCAGTGTCGTCATCAAAGCAGATAAGAAACTTTTGACTGTGCTTTTTCCTGATGGTCGTGATGGAAGAGCTTTCACACTTAAGGCTGAAACTACAGAGGATTTATATGAGTGGAAGACAGCACTTGAGAATGCTCTGGCGCAAGCCCCAAGTGCAGCTAATGTAACGGGGCAAAATGGTATCTTCAGGAACAATCAGATTGATTCAATAAATATTTCTTTGGACCAGTTGAAGGACATAGAACCAATCAAATCTACAGTCATTGGCCGGCCAATTTTACTTGCTCTGGAGGATGTTGATGGATCTCCTTCGTTTTTGGAGAAAGCCCTCAAATTCATAGAAGAGCATGGAGTGAAAGTTGAAGGGATCTTGCGACAAGCAGCTGATGTTGATGATGTTGAACATCGAGTTCGGGAATATGAACAAGGAAAAGTTGAGTTCTCTGCAGAGGAGGATGCACATGTTGTTGCTGATTGTGTAAAGCATGTACTCAGGGAATTGCCTTCATCTCCAGTCCCTGCATCTTGCTGCAAAGCTATGCTAGAAGCATGCCGAACTGAACGTGCTAGTAGGCTTTCTGCTATCCGAGCAGCAATATGTGACACTTTTCCTGAACCAAATCGTCGCTTATTGCAAAGGATACTCCTAATGATGCAATCTGTGGCATCCCACAAAGCTGAGAACAGAATGAGCTCCTCAGCTGTGGCAGCTTGCATGGCACCCTTGCTTCTTCGTCCCCTTCTGGCTGGGGAATGTGAGATTGAAAGCGATTTTGATGTGGGTGGTGATGGTTCTGTTCAACTTCTACAAGCTGCTGCCGCGGCTAACCATGCTCAAACAATTGTTATAACTTTGTTAGAAGAATATAATAGCATATTTGGGGGCTGTTGTCATATTGAAACTAGTGTTAAGGTGCACTTTTTGATTAACATGCTATTCTTTATATTGGTTAATGGTGAAGTATGGTTTGTCAGCCCAAATCCTGGTCTTGAAGGTTCTGTGTCCCCAGATATATACACTGACTCAGAAGAGAGTGGATCTGAGAGTGAGGAGGCTACTGATGATGATGAGTCATATGATGATGATTATGATGATGAATGCGAGGAATCAATACAAGGGTCTGATGCAGATGCAGATGATGGTCTTGTTAGCGAAACATCAAGCGAAACTGAAGACTTCAGCGGCAAGGATGACAAGGACCATGATCATACTAGTTCAGATTTAAAATCCTCAGGTGTGAGTGGAGATCCTCAAGTCAAGCAGATTTCATCAAATTCACTTGAAGATGTCAAAAGCAGTGAAAATCTGATGAGTCCCATTGAGAATGTTTGTGCAGAAAATTCCAATGCGCCTGCTGACATAGTTGAAGGTGTTTCCGCGGACCAAAGTACAGTGCATAATCCAAATAATCCTATCATAAAAAAATCGAAGTCCATATCTAATGGTCCAGCACATGCTCAGAGCCACACTGCATTGGGGCGTACATCTGCAATGAAGAACCTGTCCTTGGAAACCGATGATTATTCTTCTGATGAAGCTGAAATTGAGACTCTTGAAGCTATTAAGGCAGAATTGATAAACCAAATTGCAGAGGAGGCTAAGGGGAATGCAAATCTGCATTCTTATCTAGAAAATCGAAAGAAAGCTTTGCATGACCGTCATCTAGCTCTTGAGCAAGATGTGGCTAGACTACAGGAACAGTTGCGAAAGGAGAAGAATTCTCGGGCAACTCTGGAAGCAGGACTCAAGAATCCTCCAGGATTATCTGATTTAACCAGTATAGATGAAAAGACCAAGGCAGAACTTGAGGAATTAGCCATCATAGAAGCAGATATCACCAAGATACAGCGGCAGGTTGATGATCTTGGCATGCGGCTTAATTTACATTGTAAACAGAACCATAGTTCTGCATTGGATTTCAGTAATCAACCCCAGCAGATTTCAAATCATGAAACAAGAATGAAGAATAAGCTGGATACTGAAGTTGCTGCCACTTCACAGTCACAGGTTGACAAGTCAAGAAGTAAGGACGCTCATGTTGGTGTAGCAGAAAATGTGAATGAGAGAAAGCTGGAACCAACGACTTTACCTAACAAAAATCCACCTCCAACTAGTTCCAAGAAATCTGGTACAAAGGGTGAGGTAGCAAATTTCACGACTTCTACTCTGACAAAACTGACAACCAGACTAAACTTTTTGAAGGAGCGTAGTAGTCAGCTTAGAAATGAATTTCAGAATGTGCATAAAGGCCCAGGTCTCTCTGCACAGAACCTGTTCAAAGGAAAAGGATCTGAACATCAGCAAGCACAGCCATCCCCTAACAAGTCTCGAGGATCTGAAAGTCACTCTGTAACGAACCCGGATAAAGGCCGAGAGTTGGTTCACTCTGCGCAGAACATGTTAAAAGGAAAAGGATCTGAACTTCACCAACCACAGCCATCTGCCAACAAGTCTCAAGGATCTGAAAGTCGTTCTGTAACAAACCCAGAAAAAGGTAGAGCCTTGGATAGTTCCCAGTCACACCACATTCCAGATAAAGGTAAAGAAGGTCAATCACTTCAAAATTCAGACAAACTGAAAAAATCAGATAGTCAGCCACCCCATCACTCAGATAGATGGAATCAACAATCACAACAACACCTGGATAGAGGAAGGCCAGAAGGCCATCAGTCTTATAATGTGGATAAAGGTCGATGA 2988 0.4317 MTNKNAEVSQGDAGASLPPPQVGPPDHLRSRGSNGNTVFKSGSLFLSSKGIGWTSWKKRWFILTRTSLVFFRSDPSAVPQKGSEVNLTLGGIDLNNSGSVVIKADKKLLTVLFPDGRDGRAFTLKAETTEDLYEWKTALENALAQAPSAANVTGQNGIFRNNQIDSINISLDQLKDIEPIKSTVIGRPILLALEDVDGSPSFLEKALKFIEEHGVKVEGILRQAADVDDVEHRVREYEQGKVEFSAEEDAHVVADCVKHVLRELPSSPVPASCCKAMLEACRTERASRLSAIRAAICDTFPEPNRRLLQRILLMMQSVASHKAENRMSSSAVAACMAPLLLRPLLAGECEIESDFDVGGDGSVQLLQAAAAANHAQTIVITLLEEYNSIFGGCCHIETSVKVHFLINMLFFILVNGEVWFVSPNPGLEGSVSPDIYTDSEESGSESEEATDDDESYDDDYDDECEESIQGSDADADDGLVSETSSETEDFSGKDDKDHDHTSSDLKSSGVSGDPQVKQISSNSLEDVKSSENLMSPIENVCAENSNAPADIVEGVSADQSTVHNPNNPIIKKSKSISNGPAHAQSHTALGRTSAMKNLSLETDDYSSDEAEIETLEAIKAELINQIAEEAKGNANLHSYLENRKKALHDRHLALEQDVARLQEQLRKEKNSRATLEAGLKNPPGLSDLTSIDEKTKAELEELAIIEADITKIQRQVDDLGMRLNLHCKQNHSSALDFSNQPQQISNHETRMKNKLDTEVAATSQSQVDKSRSKDAHVGVAENVNERKLEPTTLPNKNPPPTSSKKSGTKGEVANFTTSTLTKLTTRLNFLKERSSQLRNEFQNVHKGPGLSAQNLFKGKGSEHQQAQPSPNKSRGSESHSVTNPDKGRELVHSAQNMLKGKGSELHQPQPSANKSQGSESRSVTNPEKGRALDSSQSHHIPDKGKEGQSLQNSDKLKKSDSQPPHHSDRWNQQSQQHLDRGRPEGHQSYNVDKGR 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1315 995 Gene3D Rho GTPase activation protein 168 391 IPR008936 -
Glsi08g1315 995 ProSiteProfiles Rho GTPase-activating proteins domain profile. 191 390 IPR000198 GO:0007165
Glsi08g1315 995 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 8 392 - -
Glsi08g1315 995 MobiDBLite consensus disorder prediction 755 817 - -
Glsi08g1315 995 Coils Coil 820 840 - -
Glsi08g1315 995 Coils Coil 644 678 - -
Glsi08g1315 995 MobiDBLite consensus disorder prediction 857 878 - -
Glsi08g1315 995 MobiDBLite consensus disorder prediction 487 504 - -
Glsi08g1315 995 Pfam RhoGAP domain 200 343 IPR000198 GO:0007165
Glsi08g1315 995 MobiDBLite consensus disorder prediction 1 33 - -
Glsi08g1315 995 SMART PH_update 38 146 IPR001849 -
Glsi08g1315 995 Pfam Leucine-zipper of ternary complex factor MIP1 648 723 IPR025757 -
Glsi08g1315 995 SUPERFAMILY PH domain-like 24 144 - -
Glsi08g1315 995 CDD PH 40 139 - -
Glsi08g1315 995 MobiDBLite consensus disorder prediction 769 783 - -
Glsi08g1315 995 MobiDBLite consensus disorder prediction 505 529 - -
Glsi08g1315 995 MobiDBLite consensus disorder prediction 932 965 - -
Glsi08g1315 995 MobiDBLite consensus disorder prediction 972 995 - -
Glsi08g1315 995 MobiDBLite consensus disorder prediction 430 529 - -
Glsi08g1315 995 MobiDBLite consensus disorder prediction 798 817 - -
Glsi08g1315 995 Coils Coil 605 625 - -
Glsi08g1315 995 ProSiteProfiles PH domain profile. 37 144 IPR001849 -
Glsi08g1315 995 SMART RhoGAP_3 197 387 IPR000198 GO:0007165
Glsi08g1315 995 SUPERFAMILY GTPase activation domain, GAP 200 392 IPR008936 -
Glsi08g1315 995 Coils Coil 989 995 - -
Glsi08g1315 995 MobiDBLite consensus disorder prediction 900 931 - -
Glsi08g1315 995 MobiDBLite consensus disorder prediction 572 592 - -
Glsi08g1315 995 CDD RhoGAP 200 338 - -
Glsi08g1315 995 MobiDBLite consensus disorder prediction 440 472 - -
Glsi08g1315 995 MobiDBLite consensus disorder prediction 842 995 - -
Glsi08g1315 995 Pfam PH domain 39 143 IPR001849 -
Glsi08g1315 995 Gene3D - 26 145 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1315 Glsi-ChrGlsi08 9520934 9534981 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1315 08 9520934 9534981 Glsi08g1315 08 9520934 9534981 ECH