Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1294 ATGTTGGAAAGTAGAAATCATTCAAGTCTTACAGTGATCTCAATCGATCAGTTTGCTTTTAGGATGGAACAAGGAAGGGTAGCAGTTGAAGACAGAAACATGAATAGAGTCCTTCTTCTATTCAACTGCACCCTGCTATCCGTAGGCACCTCCGGTGGTCCACTCATAACGCGTCTCTACTTCCTCCATGGCGGCAAACGCGTCTGGTTATCCAGCTTCCTCCAAACTGCTGGCTTCCCCATCATTTTGATTCCCCTAGCCATCTCATACTTCCGCCGCCGCCGCCACTCCGCCCCAGCCAATCTGATCTTCATGAAGCTACCTTTGTTTGTTGCCTCCGCCATCATCGGTATTATCACCGGCCTTATCAATTACCTCTATTGCTATGGCCTGGCTCGGCTTCCCGTGTCCACTTCTTCTCTGATCATTGCCACCCAACTGGCTTTCACCGCCTGCTTCGCGTTCCTTTTGGTGAGGCAAAAATTCACGGCTTACTCAGTAAACGCTGTGGTGTTGCTGACCATTGGGGCGGCGACTTTGGCTCTGCGTTCAACTGGGGATCGTCCAGCCGGTGAGTCAACTAAGCAATATGTGTTGGGTTTCGTAATGACACTAGTGGCGGCGGCCTTGAATGGATTTGTTTTTCCGTTGGTGGAGTGGGTGTACAAGAACACTAGGCAGCCCATTATATACACGCTGGTGATGGAGATTCAGCTGATATTGTGCTTTTTTGCTACTCTTTTCTGTACCCTAGGGATGCTCATCAACAATGACTTCAAGGTAATAGGAAGAGAAGCCAGAGATTACGAGCTGGGGAAAACTAAGTATTGGGTTGTGCTGGTGGGGACCGCTATAATATGGCAGAATTTCTTCTTGGGAGCAATAGGGGTTGTCTTCTGTGCCTCATCTTTATTATCTGGCATTTTAGTTGCTCTGGTATTGCCGGTAACTGAAGTTTTAGCCGTTATTTTATACAAGGAGAAATTTCAGGCAGAGAAGATAGTTGCTCTGGTAGTCTCTCTTTGGGGCTTTGTGTCTTACTTCTGGGGTGAAATTCAACAAAGCCGGGAAAAAAAGCAGAATCCCACCCCACAAATAGACTTGCCTCAAACTCTTCCTGATCCATGA 1128 0.4752 MLESRNHSSLTVISIDQFAFRMEQGRVAVEDRNMNRVLLLFNCTLLSVGTSGGPLITRLYFLHGGKRVWLSSFLQTAGFPIILIPLAISYFRRRRHSAPANLIFMKLPLFVASAIIGIITGLINYLYCYGLARLPVSTSSLIIATQLAFTACFAFLLVRQKFTAYSVNAVVLLTIGAATLALRSTGDRPAGESTKQYVLGFVMTLVAAALNGFVFPLVEWVYKNTRQPIIYTLVMEIQLILCFFATLFCTLGMLINNDFKVIGREARDYELGKTKYWVVLVGTAIIWQNFFLGAIGVVFCASSLLSGILVALVLPVTEVLAVILYKEKFQAEKIVALVVSLWGFVSYFWGEIQQSREKKQNPTPQIDLPQTLPDP 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1294 375 PANTHER OS09G0467300 PROTEIN-RELATED 32 360 IPR030182 GO:0015211|GO:0016020
Glsi08g1294 375 Pfam Purine nucleobase transmembrane transport 38 356 - -
Glsi08g1294 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 105 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1294 Glsi-ChrGlsi08 9393997 9395200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1294 49 369 Organic Solute Cotransporters AT1G28230 59.337 6.58e-138 395
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1294 08 9393997 9395200 Glsi10g2143 10 16535973 16538264 CCT
Glsi08g1294 08 9393997 9395200 Glsi08g1294 08 9393997 9395200 ECH