Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1232 ATGGCTGCTGAAGTATGTCACCAGGCTGGGACTTTCCACTCGCATTCGTATCTTAATAATTCTATTAATCACCAAAAGCTTCGGATCAACTCAATAAGATTGATGACAAAACATTTTATCAGCTGTACCGGTCTGTTAAGGACAGCGAGTAATTACTCTGGCCAGAGGAATTGTAGTGTAATTCGATCTTCAGCTTCTCAAACATCGGTGGTTGATGCAGTGTCATCCCCTTCAAGAAGCAGCACCAGTGACACATACAAGAAATCAAATGAAGCAGCATTGATCCTTATTCGGCATGGTGAATCATTGTGGAATGAAAAGAATCTGTTCACAGGTTGTGTAGATGTACCACTGAGCAAGAAGGGCATAGATGAGGCAATTGAAGCTGGAAAAAGAATCAGCAGCATTCCTGTTGATGTCATATTTACATCTGCTCTGATTCGTGCACAAATGACAGCCATGCTTGCCATGACCCAGCACCGTCGTAGAAAGGTGCCTATCATTATGCACAATGAGAGTGAACAAGCAAGGGTATGGAGCCAAATTTTTAGTGAAGATACAAAAAAACAGTCCATCCCAGTCATAGCATCTTGGCAACTAAATGAAAGAATGTATGGGGAGCTGCAGGGTCTTAATAAGCAAGAAACAGCAGACAGATATGGGAAAGAACAAGTGCATGAGTGGCGCCGAAGTTATGATATACCTCCTCCAAATGGTGAAAGTTTGGAAATGTGTGCTGAAAGGGCAGTTGCTTATTTTAGAGAGCAAATTGAACCCCAACTTTTATGTGGAAAGAATGTTATGATTGCTGCTCATGGGAATTCACTGAGATCCATTATCATGTATCTTGACAAATTAACTTCCCAAGAGGTTATTAGTTTGGAATTGTCAACTGGAATTCCCATGCTTTATATTTTCAAAGAAGGAAGATTCATTAGGAGGGGGAGTCCCATTGGACCAACCGAAGCTGGAGTTTATGCCTATACTAGGAGTTTGGCTCTTTACAGGCAGAAGTTGGATGATATGTTTTTGCATGTTTTAGTAGAGTTTCGTACCCATGGTTTGGGAGACCAGGTCCAAGTTATTGGTTTTTATCTCTTGTGGTGGTTGAGTAAGCCTGTTGTAGAAGCATCTGTAGAAGTGAAAATTTTGTTATACTTTCATCCTTCTAGCCCATTATTATAA 1185 0.4076 MAAEVCHQAGTFHSHSYLNNSINHQKLRINSIRLMTKHFISCTGLLRTASNYSGQRNCSVIRSSASQTSVVDAVSSPSRSSTSDTYKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRISSIPVDVIFTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARVWSQIFSEDTKKQSIPVIASWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAERAVAYFREQIEPQLLCGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPIGPTEAGVYAYTRSLALYRQKLDDMFLHVLVEFRTHGLGDQVQVIGFYLLWWLSKPVVEASVEVKILLYFHPSSPLL 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1232 394 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 96 105 IPR001345 GO:0003824
Glsi08g1232 394 CDD HP_PGM_like 94 313 IPR013078 -
Glsi08g1232 394 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 91 318 IPR005952 GO:0006096|GO:0016868
Glsi08g1232 394 Pfam Histidine phosphatase superfamily (branch 1) 189 297 IPR013078 -
Glsi08g1232 394 Pfam Histidine phosphatase superfamily (branch 1) 94 166 IPR013078 -
Glsi08g1232 394 Gene3D - 83 316 IPR029033 -
Glsi08g1232 394 PANTHER PHOSPHOGLYCERATE MUTASE 83 330 IPR005952 GO:0006096|GO:0016868
Glsi08g1232 394 SMART PGAM_5 93 279 IPR013078 -
Glsi08g1232 394 SUPERFAMILY Phosphoglycerate mutase-like 94 310 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1232 Glsi-ChrGlsi08 8945538 8948737 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1232 08 8945538 8948737 Glsi08g1232 08 8945538 8948737 ECH