Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1229 ATGACTGATGAGTTCACTCCCCTCTCCGAACAAACGGCCCAGATTCACTCCTGCGCTTTGGGCCCATGTTTTTATCTCCCCCAATCTCCACTCTTTTCGCCTTCTACCCATCCTCCTCCGCACTCCTCTCCCGGCCTTCTTCATACCAATCAAGAAACCAGCAAACGTAGTATAAGTATGTTGTTGGGGAAAAGACCCCGTCCTCCAATGAAGAGAACCTCAAGCATCTCGGAGATAACCTTCGATCTGAACACTAGCATGGATGTTCCACCGCCTGATCCCAATAATCCCCCTAACAGGCAGACACCAGAAGACCCACCAGCAGCCGGGAAACAGCCAGGTGGGTTCAACTGGTTAGATCAGAGGGCCTTGGCTCCAGTCTCACCCAGAAACCATACAAGGCATTCCGCCGATTTTGTAGAGACCGCTGACTTCTTGCGTGCTTGCTCTCTCTGCAAACGTCGCTTGGTACCCAGCCGTGACATCTACATGTACAAGGGTGACAGTGCTTTCTGCAGTCTAGAATGCCGTCAACAGCAGATGATTCAGGATGAGAGAAAGGAGAAGTATTCATTGGCATCGAATAAACAAGTAGTGGCTCCGCCTTCTGGATCTCAGGTCACCACCAAAGGCGAAAGCGTGGCTGCCTTGTAA 654 0.5122 MTDEFTPLSEQTAQIHSCALGPCFYLPQSPLFSPSTHPPPHSSPGLLHTNQETSKRSISMLLGKRPRPPMKRTSSISEITFDLNTSMDVPPPDPNNPPNRQTPEDPPAAGKQPGGFNWLDQRALAPVSPRNHTRHSADFVETADFLRACSLCKRRLVPSRDIYMYKGDSAFCSLECRQQQMIQDERKEKYSLASNKQVVAPPSGSQVTTKGESVAAL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1229 217 MobiDBLite consensus disorder prediction 196 217 - -
Glsi08g1229 217 Pfam zinc-finger of the FCS-type, C2-C2 138 187 IPR007650 -
Glsi08g1229 217 PANTHER FCS-LIKE ZINC FINGER 5 60 206 - -
Glsi08g1229 217 MobiDBLite consensus disorder prediction 42 58 - -
Glsi08g1229 217 MobiDBLite consensus disorder prediction 29 117 - -
Glsi08g1229 217 MobiDBLite consensus disorder prediction 90 104 - -
Glsi08g1229 217 ProSiteProfiles Zinc finger FLZ-type profile. 144 188 IPR007650 -
Glsi08g1229 217 MobiDBLite consensus disorder prediction 194 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1229 Glsi-ChrGlsi08 8926976 8928042 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1094 10 7329714 7330544 Glsi08g1229 08 8926976 8928042 CCT
Glsi08g1229 08 8926976 8928042 Glsi08g1229 08 8926976 8928042 ECH