Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1216 ATGCATTCACAGGGGCTGAAAATTCCTCTTCGGCTTTGCAGTTGCAGACTTGTGTTGCGTAGACCGGATTCAACACGCCGGTGCGATTTGGAGAATCGGGTGTTGCTCTCAGCTTACACGAAGATGAATATGCCAAGGCTGATGGTTCATAATTTTCTAAAAGCAAGTAGATTCCTTTGTCAACCTGGGAAAGTTCTTGGTCTGCCTAGTGCCTGTAGTGGTTACGCCTGTCATTTAAGATTTGACTCAATGAAAGACATCAATACCAAAACGGCTTCTAGTTTGTATTCTTTTGCGTCCAATGCTGAATCTTGCATCATAGATTCTATATCAGCCAGTGAAAATTCAAACACTTCTTCCACAAGTGTGAAATCTACGCCTGAAATTGAAAAGAAGTATGTGCATCATGTTTACGATGCAATTGCTCCCCATTTCAGTTCAACCCGGTTTGCCAAGTGGCCAAAAGTTGCCTTATTTTTGTCATCTTTGCCGTCAGGATCTCTTGTCCTAGATGCAGGTTGTGGCAATGGGAAATACTTAGGCTTAAATCATGATTGCTTCTTTGTAGGGTGTGATATAAGTCCTTCCTTGATTAAAATCTGTGCAGATAGAGGGTATGAAGTTCTGGTTGCAGATGCTGTAAATCTTCCTTACAGAACTGGTTTTGGCAATGCAGCAATATCTATAGCCGTGTTACATCATTTAAGTACTGAAAATAGAAGGAGAAAAGCAATAGAAGAATTAGTCCGAGTTGTTAAAAAGGGTGGCCTTGTTCTGATAACAGTTTGGGCTGTAGAACAAGAGGATAGATCATTGATTAGCAAATGGACTCCACTTGCACAAAAGTATGTTGAAGAGTGGATAGGACCAGGTAGTCCTCGGGCTCGGGCCCGGGCCCCTTCATCCATAACATTACAAAGTATCCCAGAATATGAATTGAGTAGCTCAGGTGAGCACATGAAAGTTTCCAACGAGAATTCAATCAAGAAAATTCAGGAAACTGCAGATCTAACTAATCAGAGTGAAAATTTAGTAGAATTAAAGGATGCAAATAATGTGAGGAACCAACAGGAATATTTTGTCCCTTGGCATTTACCCTATCATCGTGCTGAAATCAGTGGTGCTTCTGCTCATGCTCTTGCTAATGGTCTAGCAATGAAAGATGACAAAAAGGGTGCTGTAGTGTATAACAGATATTATCATGTTTTTAGTGAAGGCGAGCTTGAAAGGTTAGTAGCTGGGATAAACAACGCTAAAATTGTTGACCGCTTTTTTGACAAATCCAACTGGTGTATCATTCTTGAGAAGACATTATGA 1317 0.4062 MHSQGLKIPLRLCSCRLVLRRPDSTRRCDLENRVLLSAYTKMNMPRLMVHNFLKASRFLCQPGKVLGLPSACSGYACHLRFDSMKDINTKTASSLYSFASNAESCIIDSISASENSNTSSTSVKSTPEIEKKYVHHVYDAIAPHFSSTRFAKWPKVALFLSSLPSGSLVLDAGCGNGKYLGLNHDCFFVGCDISPSLIKICADRGYEVLVADAVNLPYRTGFGNAAISIAVLHHLSTENRRRKAIEELVRVVKKGGLVLITVWAVEQEDRSLISKWTPLAQKYVEEWIGPGSPRARARAPSSITLQSIPEYELSSSGEHMKVSNENSIKKIQETADLTNQSENLVELKDANNVRNQQEYFVPWHLPYHRAEISGASAHALANGLAMKDDKKGAVVYNRYYHVFSEGELERLVAGINNAKIVDRFFDKSNWCIILEKTL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1216 438 CDD AdoMet_MTases 169 265 - -
Glsi08g1216 438 Gene3D Vaccinia Virus protein VP39 145 437 IPR029063 -
Glsi08g1216 438 Pfam Methyltransferase domain 170 260 IPR013216 GO:0008168
Glsi08g1216 438 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 282 IPR029063 -
Glsi08g1216 438 PANTHER UNCHARACTERIZED 118 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1216 Glsi-ChrGlsi08 8821130 8823895 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1216 08 8821130 8823895 Glsi08g1216 08 8821130 8823895 ECH