Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1200 ATGACTTTTCCAAACGCCCTACTTAGACTTAGACCAAGCAAATGTCTGCTCACCCAAAAGAAAAGCAAAAAATGGAAACCACTACCATGGCTTGGCTATCAATCAAGAAAGGGAAGCCACGTAGAAACATCGGTTTTTAGGGAAGCTTACGCCACCAAGTCGCATACATTTAGACTGATTTGGTCTCTGGCGTTTCCAGCAAACTCCCCCCACTCCCATTCCCCTTTGTCTTCTTATCTTCCACGGACCCAAGGCTCGACTCACAGCTGCAAAATGAAGAATCGTAGCTTTAACAAGATCTCTGCCAAATGGATTCCCATTTTCTCTGTCTTTTCCTTCATTCTTGGTATGCTCATCACAAGCAGGATGTGGGAACCATCTGAATCAAATGGTCAGCTTATTTCACTGCAGCGGAATCAACAAGAACTGCAAGTGCTCTCAAAGGACTGCGCCAATAAAAAGAAACCTATACAGGATCAGGAAGTAATGAGCGAAGTTTTCAAAACCCATGAAGCTATTCAGCATGACAGATCTCTAGACAAGCAAGTTTCCATGCTCCAGATGGAATTAGCTGCAGCTAGGAGCTCTCGAGAAATTGGGATCTCAGATGGCTCGGCTACCACCTCTGCGCTCTCCGCCGAAGGACCGCCCGGAAAGAAGGCGTTTATAGTGATTGGCATAAACACGGCTTTCAGTAGCAGGAAGCGACGTGATTCAGTTAGAGAGACTTGGATGCCTCAAGGGGAGCAGCTTGTTCGATTGGAACGTGAGAAGGGCATTGTCATCAGATTCATGATTGGCCACAGTGCAACTTCCAACAGTATTTTAGATCGAGCTATTGATTCAGAAGAAGCTCAGCACCAAGACTTCCTTCGGCTGGAACATGTGGAAGGGTATCATGAACTGTCTGCAAAGACAAAAATTTTCTTCTCCACTGCAGTTGCAAAATGGGATGCTGATTTCTATGTCAAGGTGGATGATGATGTCCATGTCAATTTAGGTGTTCTGGCATCAACTCTTGCTCGTCATCTTTCAAAACCCAGGGTTTATATTGGTTGTATGAAATCTGGACCTGTTCTTTCTCGAAGGGATGTCAAATATCATGAACCTGAGTTCTGGAAGTTTGGAGAAGAGGGGAACAAATACTTTCGACATGCAACTGGACAGATATATGCAATCTCTAAGGACCTGGCCGCATACATTTCCATCAACCAGCCAATATTGCACAAGTATGCTAATGAAGATGTCTCACTTGGTTCATGGTTCATTGGTCTCGAAGTTGAGCACATTGATGACCGCAATATGTGCTGTGGGACTCCTCCAGATTGTGAGTGGAAGGCGCAGGCAGGTAACATATGCGTTGCATCATTTGATTGGAGCTGTAGTGGAATCTGCAAGTCAGTGGAGAAGATTAAGTATGTCCACTCAAAATGTGGTGAAGGGGATGGAGCTGTTTGGAGTGCTTTACTTTAA 1473 0.4487 MTFPNALLRLRPSKCLLTQKKSKKWKPLPWLGYQSRKGSHVETSVFREAYATKSHTFRLIWSLAFPANSPHSHSPLSSYLPRTQGSTHSCKMKNRSFNKISAKWIPIFSVFSFILGMLITSRMWEPSESNGQLISLQRNQQELQVLSKDCANKKKPIQDQEVMSEVFKTHEAIQHDRSLDKQVSMLQMELAAARSSREIGISDGSATTSALSAEGPPGKKAFIVIGINTAFSSRKRRDSVRETWMPQGEQLVRLEREKGIVIRFMIGHSATSNSILDRAIDSEEAQHQDFLRLEHVEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGVLASTLARHLSKPRVYIGCMKSGPVLSRRDVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLAAYISINQPILHKYANEDVSLGSWFIGLEVEHIDDRNMCCGTPPDCEWKAQAGNICVASFDWSCSGICKSVEKIKYVHSKCGEGDGAVWSALL 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1200 490 Gene3D - 213 436 - -
Glsi08g1200 490 Pfam Domain of unknown function (DUF4094) 101 196 IPR025298 -
Glsi08g1200 490 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 180 431 IPR002659 GO:0006486|GO:0016020|GO:0016758
Glsi08g1200 490 FunFam Hexosyltransferase 216 436 - -
Glsi08g1200 490 Pfam Galactosyltransferase 235 432 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1200 Glsi-ChrGlsi08 8737631 8742554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1200 100 490 Glycosyltransferase AT1G77810 74.490 0.0 603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1200 08 8737631 8742554 Glsi08g1200 08 8737631 8742554 ECH