Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1182 ATGCATCCTTTTTGCTGCGTCTCCGCCGTTTCTGACCAGTCTTCCCCAGTCAAACCCTCCCCTACTCCGTTCCCCAACTTCTCAATGCCTCCTCTCCCCCCCGCCGCCTCTGTCACTGCTATTCGATCCGATTCGATTTCCCGCCCCAATAATCACAACCACACGCATAGTAATCACAGCTTCGGCGAGTACGGACGGACGAGTCAGCGCGAGCAGCAACAGCCCGCGGTAGACGTGAAGATCAATGACTTGGTTGGGAACGGAATCTCGGGGATACTGCACAAGTGGGTCAATTACGGCAAAGGATGGAGACCTCGATGGTTCGTTCTTCAAGATGGCGTACTTTCGTACTACAAGATTCACGGTCCCGATAAGATCATCGTCAATCACGAAACCGAGAAGGGCTCCAAGGTTATCGGCGATGAATCCATGCGAAGGATCTCTCGCAACCGCAATTCGTATTCTCATACCCAGCATTTCCACCACCGACGGAAGCCCTTTGGGGAAGTCCATCTCAAGGTTTCGACAATTCGCGAAAGCAAATCTGATGACAAGCGTTTTTCCATTTTCACTGGAACAAAAAGGCTCCACTTGAGGGCTGAGACACGCGAAGATCGAGTGGCATGGATGGAGGCTTTGCAGGCAGTAAAAGATATGTTCCCCCGAATCTCCAACAGTGAGCTGATGGCTCCGTTAGACTATTTGACGATTTCAACTGAGAAACTGAGGCAACGACTGCTGGAAGAAGGTGTCAATGAGGCAGCCATTCAGGACAGTGAGCAAATTATGAAAAGTGAATTTGCAGCGCTACAAAGCCAGCTTGTGCTGCTGAAACAGAAGCAGTTGATCCTTACAGACACATTAAGACAGTTAGAGACAGAAAAGGTTGATCTCGAGAATACAGTTGTTGATGAGAGCCAAAGACAGTTAAATGATCAAGAGGCTTCCTCTAGATTAAGGCTGGAAAAATTTAGTGAAGGAAGTGCAAGCGAATCCGAGGATGATAATGAGAGAAATGATGCTGCAGAGGAAGAAACAGATGACGATGACAATGCCTTTTTTGACACTCGTGACTTTCTGTCGTCCAGTTCTTTTAAAAGTAGTAGTTCTGATTTTAGGGTTTCATCTTTCTCTTCGGATGATGAAGGGCTCTACACAGTTGAATCAGAGGAGGATGTAGATCCTTCAATTAGATCAGTTGGAATCAACTATCCTTGTGTTAAGCGGCGAAAGAAACTGCCAGACCCGATTGAAAAAGAGAAAGGTGTCAGTCTTTGGTCAATGATTAAGGATAATATTGGAAAGGATCTAACAAAAGTATGCCTTCCTGTTTATTTCAACGAGCCTCTCTCCTCTCTACAAAAATGTTTTGAAGAAATGGAGTATTCGTATCTCTTGGACCGAGCATATGAATGGGGAAGAAGGGGTAATAGCCTCATGAGGATCCTCAATGTGGCTGCTTTTGCCGTATCTGGCTATGCTTCTACTGAGGGAAGAATTTGCAAACCATTTAATCCCTTACTGGGGGAGACATACGAGGCCAATTATCCAGATAAAGGCCTTCGTTTTTTCTCAGAGAAGGTCAGTCATCACCCTATGATAGTCGCATGTCACTGTGAGGGTGCAGGTTGGAAATTTTGGGGGGATAGCAACTTAAAGAGCAAATTTTGGGGACGATCAATTCAACTTGACCCTGTTGGCATTTTGACTTTGGAATTTGATGATGGGGAAGTTTTCCAGTGGAGTAAGGTCACAACATCAATATATAATCTCATATTGGGGAAGCTGTATTGTGATCACTATGGCACAATGCGTATACAGGGAAACAGAGAATACTCATGTAAACTGAAATTCAAGGAACAATCTATAATTGATCGAAATCCTCACCAGGTACATGGTATTGTTCAAGATAGGAATGGGAAAACAGTGGCAACTCTATTCGGAAAATGGGATGAAAGCATGCACTATGTTAGTGGAGACTGTGCTGGGAAGGGAAAAGGTTATGACTCTTTATCAGAAGCCCGAGTACTGTGGAGGCGGAGCAAGCCTCCCACGTTTCCCACTAGATATAATTTCACTCGTTTTGCCATCATGTTAAATGAGCTTACCCCTGGATTGAAGGAAAAGCTGCCACCTACAGATTCCAGGTTAAGACCGGACCAAAGGTATTTGGAAAATGGGGAGTATGAGATGGCGAATTCAGAGAAGTTAAGGCTAGAGCAGCGGCAACGCCAGGCTAGGAAGATGCAAGAGAGCGGTTGGAAACCACAGTGGTTTGGTAGAGATAAAGCAAGCGGTACATACCGCTATTTGGGAGGGTATTGGGAGGCCAGGGAACGACGAAATTGGGACTCCTGCCCTGACATCTTCGGCCAAATCCCTTCCGATCATCTTTCTGATTGA 2403 0.4573 MHPFCCVSAVSDQSSPVKPSPTPFPNFSMPPLPPAASVTAIRSDSISRPNNHNHTHSNHSFGEYGRTSQREQQQPAVDVKINDLVGNGISGILHKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVNHETEKGSKVIGDESMRRISRNRNSYSHTQHFHHRRKPFGEVHLKVSTIRESKSDDKRFSIFTGTKRLHLRAETREDRVAWMEALQAVKDMFPRISNSELMAPLDYLTISTEKLRQRLLEEGVNEAAIQDSEQIMKSEFAALQSQLVLLKQKQLILTDTLRQLETEKVDLENTVVDESQRQLNDQEASSRLRLEKFSEGSASESEDDNERNDAAEEETDDDDNAFFDTRDFLSSSSFKSSSSDFRVSSFSSDDEGLYTVESEEDVDPSIRSVGINYPCVKRRKKLPDPIEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEEMEYSYLLDRAYEWGRRGNSLMRILNVAAFAVSGYASTEGRICKPFNPLLGETYEANYPDKGLRFFSEKVSHHPMIVACHCEGAGWKFWGDSNLKSKFWGRSIQLDPVGILTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNREYSCKLKFKEQSIIDRNPHQVHGIVQDRNGKTVATLFGKWDESMHYVSGDCAGKGKGYDSLSEARVLWRRSKPPTFPTRYNFTRFAIMLNELTPGLKEKLPPTDSRLRPDQRYLENGEYEMANSEKLRLEQRQRQARKMQESGWKPQWFGRDKASGTYRYLGGYWEARERRNWDSCPDIFGQIPSDHLSD 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1182 800 MobiDBLite consensus disorder prediction 307 353 - -
Glsi08g1182 800 ProSiteProfiles PH domain profile. 86 218 IPR001849 -
Glsi08g1182 800 Coils Coil 729 749 - -
Glsi08g1182 800 Gene3D - 721 783 - -
Glsi08g1182 800 SMART PH_update 87 220 IPR001849 -
Glsi08g1182 800 MobiDBLite consensus disorder prediction 336 352 - -
Glsi08g1182 800 SUPERFAMILY Oxysterol-binding protein-like 419 796 IPR037239 -
Glsi08g1182 800 Coils Coil 288 308 - -
Glsi08g1182 800 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 88 778 IPR000648 GO:0008289
Glsi08g1182 800 MobiDBLite consensus disorder prediction 315 335 - -
Glsi08g1182 800 MobiDBLite consensus disorder prediction 45 75 - -
Glsi08g1182 800 Pfam Pleckstrin homology domain 94 214 - -
Glsi08g1182 800 FunFam oxysterol-binding protein-related protein 1D isoform X1 510 682 - -
Glsi08g1182 800 Pfam Oxysterol-binding protein 424 779 IPR000648 GO:0008289
Glsi08g1182 800 CDD PH_ORP_plant 89 225 - -
Glsi08g1182 800 FunFam Oxysterol-binding protein-related protein 2A 721 792 - -
Glsi08g1182 800 Gene3D - 87 220 IPR011993 -
Glsi08g1182 800 Gene3D - 510 684 - -
Glsi08g1182 800 SUPERFAMILY PH domain-like 89 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1182 Glsi-ChrGlsi08 8611712 8617204 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1182 08 8611712 8617204 Glsi08g1182 08 8611712 8617204 ECH