Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1181 ATGCTGTGGCTGCTTTTTCACTCTCTGCGATACCCTGCGTTGACAGCGTCGTTCTTCTATTCACCAAAAGTAAGATTGGTAAACACAAGGCTCGGCAATCTCTTTCCCTTAATGGCATCTTCAGCTATGGATAGCAACTCACCTAGTTCGCTGGTTTTATGCGGGAAGTCACTGGCCGAGAATGAAATTGCTAAAGCTATTAAGAGCAATAACACTTTGAAGCTGCCTGACAATGGCGAAATTTCGGTTATTTTGCAGTCTGAATTGGATAAACCTTTTAAAGAAGAGTCCTTTGGAATTGATTTATTTATGAATTCTCTTTCCACTGATGAGTTTGGCAGGTTTCTCATTTGGTCCCCTGGGTTGTCTTCAACGCATGATGTGGTTTCCCACAACTTTTGTGAGCTTCCCATTGGTACAGTTTGTGTTGCTGATGTTCAGACCAAGGGACGAGGCCGGTCAAAGAATGTTTGGGAGTCTCCATTGGGCTGCCTTCTATTTTCTTTTACTCTGCAAATGGAGGATGGGCGAGTTGTTCCTTTACTCCAGTATGTAGTTTCCCTGGCTATCACGGAGGCAGTAAAGGATATCTGTGACAAAAATGGCTTACCCAGCGTTGATGTTAAAATTAAGTGGCCAAATGATCTTTACTTAAATGGCCTTAAAGTTGGAGGCATTCTATGCACCTCAACTTACAAATCAAAAAAGTTTAATGTCAGTGCAGGTATAGGCTTGAATGTCAACAATGAGAAGCCCACAACATGCTTAAATACAGTTATGAGAGAGCTGTCGGCAAATGCTTACCAATTTCAAAGAGAAGACATTCTGGCAGCCTTCTTTAACAAATTTGAGAAATTTTATAATCTATTTGTGAATCAAGGATTTCAAACCCTAGAAGAGCTATATTATAAGACATGGTTGCACAGTGGACAGAGAGTTATTGTGCAGGAAAAGAATGAGGACAAAGTGATCGAACATGTGGTGACCATTCAGGGTTTGACTTCTTCAGGTTACTTGTTGGCTGTTAGTGACGACAATCAATTGTGTGAGCTCCATCCTGATGGCAACAGCTTTGACTTTTTCAAAGGACTGGTTAGAAGGAAACTTGACTGA 1113 0.4124 MLWLLFHSLRYPALTASFFYSPKVRLVNTRLGNLFPLMASSAMDSNSPSSLVLCGKSLAENEIAKAIKSNNTLKLPDNGEISVILQSELDKPFKEESFGIDLFMNSLSTDEFGRFLIWSPGLSSTHDVVSHNFCELPIGTVCVADVQTKGRGRSKNVWESPLGCLLFSFTLQMEDGRVVPLLQYVVSLAITEAVKDICDKNGLPSVDVKIKWPNDLYLNGLKVGGILCTSTYKSKKFNVSAGIGLNVNNEKPTTCLNTVMRELSANAYQFQREDILAAFFNKFEKFYNLFVNQGFQTLEELYYKTWLHSGQRVIVQEKNEDKVIEHVVTIQGLTSSGYLLAVSDDNQLCELHPDGNSFDFFKGLVRRKLD 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1181 370 PANTHER BIOTIN PROTEIN LIGASE 49 368 - -
Glsi08g1181 370 NCBIfam biotin--[acetyl-CoA-carboxylase] ligase 120 344 IPR004408 GO:0004077|GO:0036211
Glsi08g1181 370 Pfam Biotin protein ligase C terminal domain 308 363 IPR003142 GO:0036211
Glsi08g1181 370 Gene3D Bira Bifunctional Protein; Domain 2 104 305 IPR045864 -
Glsi08g1181 370 ProSiteProfiles Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. 101 291 IPR004143 GO:0036211
Glsi08g1181 370 SUPERFAMILY Class II aaRS and biotin synthetases 102 306 IPR045864 -
Glsi08g1181 370 Pfam Biotin/lipoate A/B protein ligase family 123 246 IPR004143 GO:0036211
Glsi08g1181 370 CDD BPL 115 290 IPR004408 GO:0004077|GO:0036211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1181 08 8600187 8604814 Glsi08g1181 08 8600187 8604814 ECH