Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1175 ATGCTGAAGCTGCACCTCGGTGATAGAATAATTACGGAGAAGGTTGACTACATGCTCTTCTTTTGTTTCCATTGTTTTCCCCTCTTAATTCTTGAAGCTACAACCATGGCTTCTGAGAAAGTTGAGACTGTCATTGCGGGAAACTACTTGGAAATGGAGAGAGAGGAGGGAGATTCTAAGTCGGCAAAGAGCAAACTATCTAAGTTCTTCTGGCATGGTGGCTCGGTCTATGATGCATGGTTTAGCTGTGCTTCTAATCAGGTTGCACAAGTGCTGCTGACATTACCATATTCGTTTTCACAACTGGGGATGTTATCTGGCATTCTTTTTCAGCTTTTCTACGGGCTGATGGGAAGTTGGACTGCTTACCTTATCAGTGTGCTTTATGTTGAGTACAGAACCAGAAAGGAGAGAGAAAAGGTTGATTTCAGGAACCATGTGATTCAGTGGTTTGAAGTTCTTGATGGACTCCTAGGCAAACACTGGAGAAATTTAGGCCTCTTTTTCAACTGCACTTTTCTTCTGTTTGGATCCGTAATTCAACTAATTGCCTGCGCAAGTAACATATACTACGTAAACGACCATCTTGACAAAAGAAGTTGGACTTACATCTTTGGCGCCTGCTGTGCGACAACAGTGTTCATCCCTTCTTTCCACAATTACAGAATTTGGTCATTCTTGGGCCTCATGATGACCACTTACACTGCATGGTATCTGACCATAGGTTCCCTACTTCACGGACAGGTTGAGGGGGTGAAGCACTCAGGCCCAACCAAATTGGTTCTCTATTTTACTGGGTCTACCAACATTCTCTACACTTTCGGTGGACATGCTGTTACAGTGGAAATTATGCATGCAATGTGGAAGCCACAGAAGTTCAAGTTGATATATCTGATAGCAACACTATATGTGCTGACTTTAACTTTGCCATCAGCAGCTGCAGTGTATTGGGCCTTTGGGGATACGCTCCTCACCCATTCCAATGCCCTCTCTTTGCTTCCAAGGACAAGGTTCAGGGATACCGCTGTCATTCTCATGCTTATTCACCAGTTCATAACATTTGGATTTGCTTGTACTCCTCTCTACTTTGTGTGGGAGAAATTCATCGGGGTACACGAAACCAAAAGCTTGTTCAAAAGGGCCTTGGCTAGACTTCCTGTGGTGATTCCAATATGGTTTCTTGCAATCATATTCCCTTTCTTTGGCCCCATCAACTCAACTGTTGGATCTCTCTTGGTCAGCTTCACCGTCTACATAATCCCTGCCATGGCACACATGGTGACCTTTGCTTCAGCCCCGGCTAGGGAGAATGCTGTGGAGAAACCGCCATCATTTTTAGGAGGGTGGGTAGGATTGTACTCGACGAACGTGTTTGTGGTGGTGTGGGTTTTGGTGGTAGGATTTGGGTTGGGAGGATGGGCAAGCATGCTAAATTTCATACAACAAGTGAACACATTTGGCCTATTTGCCAAGTGCTATCAGTGTCCTCCTCACAAGGCTTAA 1503 0.4478 MLKLHLGDRIITEKVDYMLFFCFHCFPLLILEATTMASEKVETVIAGNYLEMEREEGDSKSAKSKLSKFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLMGSWTAYLISVLYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNLGLFFNCTFLLFGSVIQLIACASNIYYVNDHLDKRSWTYIFGACCATTVFIPSFHNYRIWSFLGLMMTTYTAWYLTIGSLLHGQVEGVKHSGPTKLVLYFTGSTNILYTFGGHAVTVEIMHAMWKPQKFKLIYLIATLYVLTLTLPSAAAVYWAFGDTLLTHSNALSLLPRTRFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHETKSLFKRALARLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPAMAHMVTFASAPARENAVEKPPSFLGGWVGLYSTNVFVVVWVLVVGFGLGGWASMLNFIQQVNTFGLFAKCYQCPPHKA 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1175 500 PANTHER OS05G0424000 PROTEIN-RELATED 78 461 - -
Glsi08g1175 500 Pfam Transmembrane amino acid transporter protein 72 464 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1175 Glsi-ChrGlsi08 8567149 8569501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1175 36 499 Organic Solute Cotransporters AT1G77690 86.994 0.0 823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1175 08 8567149 8569501 Glsi08g1175 08 8567149 8569501 ECH