Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1160 ATGGAAGGTCAGAAGAGCCAGGCGAAGCTTACTAGAACCAACTCTTCACTCCTTCGTTCCTCACCCACAATTCGTTCATCCATTCACAGCCTCTCTTCGGTCAACGAAGACGACTTTATCGCTGCTCAAGAGGAAGAGGAGAAGGTAAAGCCCGCCAAGTTGGCTTCCACTCCGGGAACCGGGTCAACCCGCCTCATTGTCCCGGTTATTGTCATTGCCTCGTTGGGTTTCTTTTCCATATGTTCATTTTTCTTCTTCCTTTTCTACTTTTTCTATCTCGGAAGTGAACGGATGCCCACTTCGGAGAACCTATTGTTAGCGTTGATTTTTATTGCCGTCGGGCTATACTTTGCATCCAAGAACAAGAGGGTGATTCACCGGACCCTTTCAATCCTGAAACATTTGTGGGATGAAAATCTGAAAAAACTCGGCTTTACCAAGACGAACTCAAAGCATGTTCAGTGGTTCATCGGGGATTCCACTGCAGTTAAAGGGCGAAAGGAGAAGAAGATTATTAGGGAGGGCGTGGAGTTTTACGGCAATGGCGACTTCTATGAGGGCGAGTTCCATGAGGGAAAATGTAATGGAAGTGGGGTTTACAATTATTTCGCGAACGCAAGATATGAGGGTGACTGGGTGGACGGAAGGTATGATGGGTATGGAATTGAGAGCTGGGCAAGAGGTAGTCGCTACCGGGGACAGTATAGGCAGGGTTTGAGGCATGGCTATGGGGTTTATAGGTTCTATACAGGGGACTCTTATGCAGGGGAATGGTGTAACGGTCAGAGCTACGGTGTAGGAGTTCAGACTTGCTCCGATGGTAGCTGTTATATCGGCGAGTTCAAGTACGGCGTCAAGCACGGACTCGGATGTTACCATTTTAGGAATGGAGATAGATATGCCGGAGAGTATTTTGGAGACAAAATACATGGATTTGGGGTGTATCATTTTGCTAATAGTCACTGTTATGAGGGAGCATGGCACGAAGGGCGTAGGCAAGGTTATGGCATGTATACATTTCGAAATGGTGAGAGAAGATGTGGTGAATGGGATGCCGGCAACCTCAATCACCCATTAACATCACTAACCGATCCAGTGCTTCGAGCTGTACAGGCTGCGAGGAAAACAGCAGGGAATGCTATAAACCTTCGGCGGGTCGATGACCAGGTGAATAAAGCAGTAATCGCCGCAAACAGAGCTGCCACTGCTGCTAGAGTTGCCGCTGTAAAAGCTGTTCAAAACAGGATGGATGGTAATTTTTGCGATACTCACGTTTGA 1278 0.4757 MEGQKSQAKLTRTNSSLLRSSPTIRSSIHSLSSVNEDDFIAAQEEEEKVKPAKLASTPGTGSTRLIVPVIVIASLGFFSICSFFFFLFYFFYLGSERMPTSENLLLALIFIAVGLYFASKNKRVIHRTLSILKHLWDENLKKLGFTKTNSKHVQWFIGDSTAVKGRKEKKIIREGVEFYGNGDFYEGEFHEGKCNGSGVYNYFANARYEGDWVDGRYDGYGIESWARGSRYRGQYRQGLRHGYGVYRFYTGDSYAGEWCNGQSYGVGVQTCSDGSCYIGEFKYGVKHGLGCYHFRNGDRYAGEYFGDKIHGFGVYHFANSHCYEGAWHEGRRQGYGMYTFRNGERRCGEWDAGNLNHPLTSLTDPVLRAVQAARKTAGNAINLRRVDDQVNKAVIAANRAATAARVAAVKAVQNRMDGNFCDTHV 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1160 425 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 260 305 - -
Glsi08g1160 425 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 101 378 - -
Glsi08g1160 425 Gene3D - 261 305 - -
Glsi08g1160 425 Gene3D - 215 260 - -
Glsi08g1160 425 Gene3D - 306 373 - -
Glsi08g1160 425 Gene3D - 167 214 - -
Glsi08g1160 425 SMART morn 252 273 IPR003409 -
Glsi08g1160 425 SMART morn 183 205 IPR003409 -
Glsi08g1160 425 SMART morn 298 319 IPR003409 -
Glsi08g1160 425 SMART morn 321 342 IPR003409 -
Glsi08g1160 425 SMART morn 275 296 IPR003409 -
Glsi08g1160 425 SMART morn 229 250 IPR003409 -
Glsi08g1160 425 SMART morn 206 227 IPR003409 -
Glsi08g1160 425 Pfam MORN repeat 185 200 IPR003409 -
Glsi08g1160 425 Pfam MORN repeat 323 345 IPR003409 -
Glsi08g1160 425 Pfam MORN repeat 254 275 IPR003409 -
Glsi08g1160 425 Pfam MORN repeat 277 299 IPR003409 -
Glsi08g1160 425 Pfam MORN repeat 208 230 IPR003409 -
Glsi08g1160 425 Pfam MORN repeat 300 320 IPR003409 -
Glsi08g1160 425 Pfam MORN repeat 231 252 IPR003409 -
Glsi08g1160 425 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 214 259 - -
Glsi08g1160 425 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 168 213 - -
Glsi08g1160 425 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 225 353 - -
Glsi08g1160 425 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1160 Glsi-ChrGlsi08 8481737 8483562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1160 181 355 Acyl Lipid Metabolism Gene Families AT1G21980 35.429 3.44e-28 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1160 08 8481737 8483562 Glsi08g1160 08 8481737 8483562 ECH