Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1157 ATGGCCACGCTTCACTGCTTGCATATCTTACTCATTCATCTCAGTCTCCTCGTCTCGGCATCTCTTCTCTCTGCGACTCCTCCGCCCTCACCTCAACACCAAGAACAAGACACGCCCATCACTCGCTTTCAGCGCTACCTCCGAATTAAAACGGCTCACCCAAAACCAGACTATTCTTCCGCTGTATCCTTCCTCGTATCTCAAGCACAATACATTGATATCCAACATCAGACTCTAGAATTTTCACCGGGAAAGCCCGTTCTCCTCCTTACATGGTTTGGCTCAAATCCTTCTCTCCCCTCTGTCCTCTTCAATTCCCACCTGGATTCTGTTCCCGCCGAGCCCTCCAAGTGGCTCCACCCGCCCTTCTCTGCTGTTCGGACGCCTGACGGTAAAATATTTGCCCGTGGAGCCCAGGACGACAAATGCATTGGCATGCAATACATTGAGGCAATTCGGAATCTAAAACAGAAGAATTTCACGCCTACTCGCACTATCCATGTATCCTATGTGCCGGATGAGGAGATAGGTGGGCTTGATGGGGCCGCCAAGTTTGTTTCTTCGAAGGAATTCGAGGATTTGAATGTTGGGTTTGTGTTGGATGAAGGGCAGGCCTCGCCTGGTGATGAGTTTAGAGTTTTCTATGCGGATAGGTCCCCATGGGGATTGAAAATCAAGGCAAAGGGACCACCTGGACATGGGTCGAGGATGTATGATAACAGTGCAATGGAGAATTTGATGAAGAGCTTTGAAGTTTTGAGCAGGTTTAGGGAGAGTCAATTTGATGCGGTTAAGGCGGGTAAAGCTGCTAATTCCGAAGTTATTTCGGTCAACCCTGTTTACGTTATAGCTGGGGTTACTTCAGCCGATGAATTTGTAATGAATGTGCAACCTTCAGAAGCAGAAGCAGGCTTTGATATTAGGTTGCCCCCTACAGCAAACCCAGAAGAAATAAGAAGAAGAATTTCTGAAGAATGGGTACCAGCTAATAGAAATATGTCATACGAGATCATAGAGAAAGGACCCATTAGAGACCACATGGGGCACCCTTTAATGACCGTAACTAATGCTTCAAATCCATGGTGGTTAGTTTTCGAGCAGGCAATAACATCAGCTGGGGGGAAACTTGCAAAGCCTGAAATTCTTGCTTCTACAACTGATGCTCGGTTCATCAGACAGAAAGGAATTCCTGCACTTGGTTTCTCACCAATGACAAATACTCCCATCTTGCTTCATGACCACAACGAGCACCTACAAGATACCGTGTACATGAAGGGCATAAAGGTGTACGAGACTGTGATGAGTTCCTTGAGTTCATTTAGGGAAGCACCGAATTCGGTGTCCAGAGTTATTCCTTAG 1359 0.4687 MATLHCLHILLIHLSLLVSASLLSATPPPSPQHQEQDTPITRFQRYLRIKTAHPKPDYSSAVSFLVSQAQYIDIQHQTLEFSPGKPVLLLTWFGSNPSLPSVLFNSHLDSVPAEPSKWLHPPFSAVRTPDGKIFARGAQDDKCIGMQYIEAIRNLKQKNFTPTRTIHVSYVPDEEIGGLDGAAKFVSSKEFEDLNVGFVLDEGQASPGDEFRVFYADRSPWGLKIKAKGPPGHGSRMYDNSAMENLMKSFEVLSRFRESQFDAVKAGKAANSEVISVNPVYVIAGVTSADEFVMNVQPSEAEAGFDIRLPPTANPEEIRRRISEEWVPANRNMSYEIIEKGPIRDHMGHPLMTVTNASNPWWLVFEQAITSAGGKLAKPEILASTTDARFIRQKGIPALGFSPMTNTPILLHDHNEHLQDTVYMKGIKVYETVMSSLSSFREAPNSVSRVIP 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1157 452 Pfam Peptidase family M20/M25/M40 103 434 IPR002933 GO:0016787
Glsi08g1157 452 CDD M20_AcylaseI_like 37 438 - -
Glsi08g1157 452 SUPERFAMILY Zn-dependent exopeptidases 36 438 - -
Glsi08g1157 452 NCBIfam N-acyl-aliphatic-L-amino acid amidohydrolase 33 440 IPR010159 GO:0004046|GO:0005737|GO:0006520
Glsi08g1157 452 FunFam Aminoacylase 1 31 222 - -
Glsi08g1157 452 PIRSF ACY-1 30 442 - -
Glsi08g1157 452 FunFam aminoacylase-1 isoform X1 222 333 - -
Glsi08g1157 452 Gene3D - 223 332 - -
Glsi08g1157 452 Pfam Peptidase dimerisation domain 218 324 IPR011650 -
Glsi08g1157 452 PANTHER AMINOACYLASE-1 32 441 - -
Glsi08g1157 452 SUPERFAMILY Bacterial exopeptidase dimerisation domain 222 326 IPR036264 -
Glsi08g1157 452 Gene3D - 359 440 - -
Glsi08g1157 452 Gene3D Zn peptidases 30 222 - -
Glsi08g1157 452 FunFam Aminoacylase-1, putative 359 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1157 Glsi-ChrGlsi08 8459308 8462580 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1157 08 8459308 8462580 Glsi08g1157 08 8459308 8462580 ECH