Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1149 ATGGCAGAGGAAGCAAGCGAGACTCCTGAGAAGGATGTGAAGATGGAGGCACCCGGTATAGAGTTGCAGATTCAGAGTGCTATGCGTTCTCGTGTTGCACACTTCAAGGAACAAGCCGATTCTTTGACGTTTGAGGGGGTTCGTAGATTGCTTGAGAAAGACTTGGGATTGGAGGCATATGCTTTGGATGTGCATAAGAGATTTGTCAAGCAATGTTTGTTGAAGTGCTTAGAAGGCGTTGGAGATGATGAGGCCTCAAAGATATCTGGGGAGGCAGGGGAAAAAGGTGCAAGTACACAAGAGACAGAAGGATCAAGCGAAGAATTCCAATCAAAAAAAGATGTAAAGAAACGTTGCCAGGGAGATGAAGCAAAAATGGAAGATTCTCCGGTATTAGGTCTGCTAAATGAACAGAAACCAGTTAAACCTGAAAACTGGGAAGCTGAAGGCAATGGGAAAAAAGTAGTTCCAAGTGAAACCATAATTAAGAAAGCCATTAGAAAAAGAGCGTCTTATGTCAAAGCAAATTCAGCGAAAGTCACAATGGCTGGTCTACGTCGACTATTGGAGGAGGATCTTAAACTTGATAAATTTACTCTTGATCCCTATAAAAAGTTTATAACACGACAGCTAGATGAGGTGTTAAAGTCTTCTGAAGTTTCAGAACCTGCAAACAACGCCAAAAAATTTGTTAAGAAAAAACCTGATACTAAGGCAACCAAAAAGGTCAGCAGTGAAGAGAGCTCTGCTACTTCAGAACAGGAGAGTGAAGAGGAAGAGGAAGAGAAACAGGAAGATGAAGTTAAACCCAAAAAAAGAAGTATTCTGAAAGGGAAGATGCAGAATTCTGTTGACCGTAAAAAGCGGAAAGGACCCCCTGAGGAAACCAGACTATCCAATAAGAAAAGGATCAAGCCTGCTAATAAAGCATCAGAAGATAAAAGTGATACAGAAGATACTGGAAAAAACTCTGAAGATGATCGGTCCCAATCATCACTGGAGAAACCTACAAAGAAGAAAGAAGTTTCAACTCCTATGTATGGTAAACACGTGGAGCGCCTAAAATCTGTTATTAAAGAATGTGGAATGAGTATTCCCCCCTCAATCTACAAACAAGTTAAGCAGGTGCCTGAAAACAAGCGGGAAGCCCAGCTAATAAAGGAGTTGGAGGGAATACTGTCTAGAGTAGGATTGTCTTCAAATCCATCTGAAAAAGAAATCAAGGAAGTAAGAAGGAAGAAGGAAAGAGCAAAAGAACTCGAGGGTATCGATGTGAGTAATATTGTGTCAAGTTCACGTCGTAGATCAACAACTAGTTTTGTTGTGCCTCCAAAGCCCAAGATACCAGTTGAAACTAAAACTAATGGTGATGATGTTGAGGATAATGACAATGACAATGACAATGACAATGAAGACAATGATGATGAAGAGGATGAAGAAACTGCAGAAGAGGATAATAGTGATGAGGATGATGATGATGATGATGATGGAAGTCAAAGTGAGGAATTTAATGAGGATGAAGAGGACAGTGATTGA 1536 0.4056 MAEEASETPEKDVKMEAPGIELQIQSAMRSRVAHFKEQADSLTFEGVRRLLEKDLGLEAYALDVHKRFVKQCLLKCLEGVGDDEASKISGEAGEKGASTQETEGSSEEFQSKKDVKKRCQGDEAKMEDSPVLGLLNEQKPVKPENWEAEGNGKKVVPSETIIKKAIRKRASYVKANSAKVTMAGLRRLLEEDLKLDKFTLDPYKKFITRQLDEVLKSSEVSEPANNAKKFVKKKPDTKATKKVSSEESSATSEQESEEEEEEKQEDEVKPKKRSILKGKMQNSVDRKKRKGPPEETRLSNKKRIKPANKASEDKSDTEDTGKNSEDDRSQSSLEKPTKKKEVSTPMYGKHVERLKSVIKECGMSIPPSIYKQVKQVPENKREAQLIKELEGILSRVGLSSNPSEKEIKEVRRKKERAKELEGIDVSNIVSSSRRRSTTSFVVPPKPKIPVETKTNGDDVEDNDNDNDNDNEDNDDEEDEETAEEDNSDEDDDDDDDGSQSEEFNEDEEDSD 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1149 511 MobiDBLite consensus disorder prediction 402 511 - -
Glsi08g1149 511 MobiDBLite consensus disorder prediction 214 349 - -
Glsi08g1149 511 MobiDBLite consensus disorder prediction 226 243 - -
Glsi08g1149 511 MobiDBLite consensus disorder prediction 402 422 - -
Glsi08g1149 511 MobiDBLite consensus disorder prediction 106 125 - -
Glsi08g1149 511 MobiDBLite consensus disorder prediction 460 511 - -
Glsi08g1149 511 SMART CHZ_2 414 449 IPR019098 -
Glsi08g1149 511 Pfam Histone chaperone domain CHZ 415 447 IPR019098 -
Glsi08g1149 511 MobiDBLite consensus disorder prediction 425 439 - -
Glsi08g1149 511 Coils Coil 249 269 - -
Glsi08g1149 511 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 156 216 IPR014876 -
Glsi08g1149 511 PANTHER HIRA-INTERACTING PROTEIN 3 1 510 IPR037647 -
Glsi08g1149 511 MobiDBLite consensus disorder prediction 265 349 - -
Glsi08g1149 511 MobiDBLite consensus disorder prediction 84 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1149 Glsi-ChrGlsi08 8398776 8405598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1149 15 448 EF-hand Containing Proteins AT1G44780 43.249 7.20e-93 289
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1149 08 8398776 8405598 Glsi08g1149 08 8398776 8405598 ECH