Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1144 ATGGAAGAGAGCCTAATCTGCCAGTGGAGCGTGATTAGATCCCTTTTGGCAATTCTTCAATGGTGGGCTTTCAATGTCACCGTAATTATCATGAACAAATGGATCTTCCAGAAATTGGATTTCAAGTTTCCCCTGTCAGTATCTTGTGTCCACTTCATCTGCTCAGCCATTGGAGCATACACGGTAATTAAGGTGCTGAAGCTTAAACCCTTGATAACCGTTGACCCAGAAGATCGCTGGAGAAGAATCTTTCCAATGTCATTTGTGTTCTGTATTAACATAGTGTTGGGGAATGTGAGCTTGCGATACATTCCAGTTTCTTTTATGCAGACAATAAAGTCATTTACACCTGCAACCACAGTTGCTCTGCAATGGCTAGTTTGGAGAAAACATTTTGACTGGCGTATTTGGGCTTCTCTTGTGCCCATTGTTGGTGGGATTCTTCTCACATCTGTTACAGAGCTTAGTTTTAACATGTTCGGTTTTTGTGCTGCCTTATTTGGCTGTTTGGCAACATCTACAAAGACCATCCTTGCTGAGTCTCTTCTGCATGGATACAAATTTGACAGCATAAACACAGTTTATTACATGGCACCTTTTGCAACAATGATCTTGGCAGTACCCGCAATGTTACTTGAAGGCAATGGAGTTCTTGAGTGGCTCAATACTCATCAACATCCTTGGTTGGCCCTCACCATTATTTTGAGCTCAGGCGTTATGGCTTTCTGCCTTAACTTCTCTATCTTTTATGTGATTCACTCAACCACTGCTGTAACATTTAACGTTGCTGGAAACCTTAAGGTTGCAGTCGCTGTCCTTGTTTCTTGGCTGATATTTCGGAACCCAATTTCACCTTCAAATGCTTTTGGATGTGCCGTGACTCTTGTGGGATGTACATTCTATGGTTACGTCAGGCATATGCTATCCCAACAGCCAACATCAGTTCCAGGGACACCTCGAACACCTAGAACGCCAAGAACACCCCGGAATCCCAGGAGTAAGATGGAGCTGCTTCCCCTTGTAAATGATAAATTAGAGGACAAGGTCTAA 1050 0.4305 MEESLICQWSVIRSLLAILQWWAFNVTVIIMNKWIFQKLDFKFPLSVSCVHFICSAIGAYTVIKVLKLKPLITVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVALQWLVWRKHFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMILAVPAMLLEGNGVLEWLNTHQHPWLALTIILSSGVMAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISPSNAFGCAVTLVGCTFYGYVRHMLSQQPTSVPGTPRTPRTPRTPRNPRSKMELLPLVNDKLEDKV 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1144 349 Gene3D - 14 156 - -
Glsi08g1144 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 300 - -
Glsi08g1144 349 FunFam UDP-galactose transporter 1-like 47 158 - -
Glsi08g1144 349 PANTHER SOLUTE CARRIER FAMILY 35 15 305 - -
Glsi08g1144 349 Pfam Triose-phosphate Transporter family 15 301 IPR004853 -
Glsi08g1144 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 71 152 - -
Glsi08g1144 349 MobiDBLite consensus disorder prediction 311 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1144 Glsi-ChrGlsi08 8361826 8365195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1144 1 349 Organic Solute Cotransporters AT1G77610 86.571 0.0 604
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1144 08 8361826 8365195 Glsi08g1144 08 8361826 8365195 ECH