Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1080 ATGGCCACAAGTTTCTCCTGCATGCTTTCAGCGAAATTGTCCATGGTGGGTTGGATTGGTGGCAGAAGAGAATTGAGAAATAGGAGAGCACTTTCCATTTCAGCTCAACAACAAACAGAAGTTGAGGAGGGGGTGAAGGTACAAGAAGAGCAAGAACAACAAAATAGTCAGAAGGTGAAGCCGCAAGGAACAAAACCAAGGCCGGTGGAACCACAGTTAAATGTAAAGAGCAAAAACATGAGCAGGGAGTATGGAGGACAGTGGCTTAGCAGCGCCACCCGCCATGTGAGGATCTATGCAGCATATATCGACCCAGTAACTTGTGAGTTTGATCAAACCCAGATGGATAAGCTCACCCTTATTCTTGATCCTACTAATGAGTTTGTGTGGACTCCTGACACTTGCTATAAGGTTTACTCTTACTTCCAAGAGCTTGTGGATCATTACGAGGGTGCTCCTTTGACAGAATACACCCTTCGCCTGATTGGTTCAGACATCGAGCACTACATAAGGAAGCTGCTATACGATGGGGAAATCAAGTACAACATGAACGCTAAGGTACTTAATTTCAGCATGGGCAAGCCACGCGTTATGCTCAATAATGATATTCCGACTCAAGAGGCTCTTGAGTAA 633 0.4518 MATSFSCMLSAKLSMVGWIGGRRELRNRRALSISAQQQTEVEEGVKVQEEQEQQNSQKVKPQGTKPRPVEPQLNVKSKNMSREYGGQWLSSATRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPTNEFVWTPDTCYKVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKYNMNAKVLNFSMGKPRVMLNNDIPTQEALE 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1080 210 MobiDBLite consensus disorder prediction 35 76 - -
Glsi08g1080 210 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT M, CHLOROPLASTIC 1 206 IPR018922 GO:0016655
Glsi08g1080 210 Pfam Cyanobacterial and plastid NDH-1 subunit M 89 197 IPR018922 GO:0016655
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1080 Glsi-ChrGlsi08 7938080 7938994 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1080 08 7938080 7938994 Glsi08g1080 08 7938080 7938994 ECH