Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1043 ATGGCTACTGTTTGCTGGCCATATTTTGATCCTGAGTATGAGAACTTCAGCAACAGAATCAACCCTCCAAGGGTCTCTGTGGATAATGCTAGTTGCCATGATTGTACACTGATCAAGGTTGATAGTGTTAACAAACCTGGAATTCTGTTGGAAGTCGTGCAAATTCTTACAGACCTTGACTTCATAATCACCAAAGCTTACATCTCTTCCGATGGTGGATGGTTTATGGATGTATTTCATGTCACCGATCAGCAAGGAAAGAAGATAACAGACATCAAAACCATTGACTTCATAGAGAAGGCTCTAGGACCCAAGGGCCAGAGTACAGAAGGTGTGAAGAGTTGGCCAGCCAAACGGGTTGGGGTGCACTCCTGTGGTGATCATACAGCCATTGAGCTGATTGGGAGAGACCGCCCTGGACTCTTGTCTGAGATCTCAGCTGTTCTTGCCAATCTCCACTTCAATGTGGTTGCAGCCGAAGTTTGGACTCATAATGGACGTATAGCATGTGTTCTTTATGTTAACGATGCTAGTACCCGAGCCGTCAATGACTCAAACAAATTATCTCTTATGGAGGAGCAGCTCAACAATATCCTACGTGGATGTGAGGATGACGAGAAAGTGGCTCGCACCAGTTTCTCTATGGGTTTCACCCATATGGATAGGCGGCTCCACCAAATGTTGTTTGCTGATCGGGATTATGAATGTGCCGGAGTAACAACAGACGTTGACTATCCTCCCTCTTCCAGGCCAGAAATAATGATAGAGCGTTGTGAGGAGAAAGGGTACTCAGTGGTTAGTGTTAGATGCAAAGATCGGGCGAAACTGATGTTTGACATTGTTTGCACTCTCACTGACATGCAATATGTTGTTTTCCATGCTACCATCTCATCAGATGGCCCTTATGCATCCCAGGAGTACTTTATTCGGCACATGGATGGATGCACGCTTGATACTGAAGGAGAGAAAGAAAGGGTCATTAAATGTATTGAAGCTGCTATTCAAAGAAGAGTAAGCGAGGGTGTACGCCTTGAACTGTGTGCAAAGGATAGAGTTGGGTTGCTATCAGAAGTAACAAGGATTCTACGAGAGAATGGGTTGACAGTTTGTAGGGCAGGTGTATCTACCATCGGGGAGCAAGCACTGAATGTCTTCTACGTGAGAGATGCTTCTGGAAATCCAGTGGACATGAAGGTTGTCGAAGCACTTCGCAAAGAAATTGGCCAGACAATGATGGTTAATGTCAAGAGGGTACCTGCCAATGCTAAGGCACCTGAGGCCCGAGGATGGGCTAAAACAAGCCTCTTCTTTGGGAACTTGTTGGAAAGATTCTTGTCTTGA 1341 0.4549 MATVCWPYFDPEYENFSNRINPPRVSVDNASCHDCTLIKVDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDIKTIDFIEKALGPKGQSTEGVKSWPAKRVGVHSCGDHTAIELIGRDRPGLLSEISAVLANLHFNVVAAEVWTHNGRIACVLYVNDASTRAVNDSNKLSLMEEQLNNILRGCEDDEKVARTSFSMGFTHMDRRLHQMLFADRDYECAGVTTDVDYPPSSRPEIMIERCEEKGYSVVSVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDGPYASQEYFIRHMDGCTLDTEGEKERVIKCIEAAIQRRVSEGVRLELCAKDRVGLLSEVTRILRENGLTVCRAGVSTIGEQALNVFYVRDASGNPVDMKVVEALRKEIGQTMMVNVKRVPANAKAPEARGWAKTSLFFGNLLERFLS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1043 446 CDD ACT_ACR_4 341 412 - -
Glsi08g1043 446 ProSiteProfiles ACT domain profile. 37 116 IPR002912 -
Glsi08g1043 446 Gene3D - 128 210 - -
Glsi08g1043 446 SUPERFAMILY ACT-like 125 201 IPR045865 -
Glsi08g1043 446 ProSiteProfiles ACT domain profile. 130 213 IPR002912 -
Glsi08g1043 446 ProSiteProfiles ACT domain profile. 343 420 IPR002912 -
Glsi08g1043 446 Pfam ACT domain 37 85 IPR002912 -
Glsi08g1043 446 Pfam ACT domain 130 199 IPR002912 -
Glsi08g1043 446 SUPERFAMILY ACT-like 339 408 IPR045865 -
Glsi08g1043 446 CDD ACT_ACR_1 35 106 - -
Glsi08g1043 446 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 6 416 IPR040217 -
Glsi08g1043 446 CDD ACT_ACR_3 263 337 - -
Glsi08g1043 446 Gene3D - 339 419 - -
Glsi08g1043 446 SUPERFAMILY ACT-like 32 106 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1043 Glsi-ChrGlsi08 7666235 7670385 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1043 08 7666235 7670385 Glsi08g1043 08 7666235 7670385 ECH