Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1039 ATGGAAAAACAGGGGGCTGTTGTGATAGTGGGTGCAGGGCCTGCAGGCTTAGCAACCTCTGCATGCCTTAATAGGCTCTCCATTCCCAACGTTGTCTTAGAAAAAGATGAATACCATGCTGCACTTTGGAGGAAAAGGACCTATGACCCCTTAAAGCTTCACTTCGCCGAGCAATTTTGTCATCTTCCTCGGATGCCCTTTCCTTCTCATGCACCCACATTTGTCCCTAGGATTTATTTTATGCGTTACCTGGATCATTATGTGTCCCATTTCAACATCGGCGTTCTCTACAATCGGTCTGTGGAGTCTGCATTACTGGGCGAAAACGATGGAAAATGGAGGCTTACCGTGAAGGACACAGACAAATGTCAATATCTGAATGGAAGGGAATGGTACAACAAAAATGTCTTGGTCGTTGGTTCTGGGAATTCCGGAATGGAGATTGCTTTTGACCTCTCAGATTGGGGTGCCAATACCTTCATTGTCGTCAGAAATCCGATACATCTTCTCAGTAAAGAAATGATTGATGTTGGGGAATGCATCTGGATTACAAAGAGCTGTTCAATGAGAATGGAATACCTAAACGTAGTTATCCAAATCACTGAAAAGGAGAAAATGGCATCTACTGTGCTGGATTTTCGAGAAGAGGGTTAG 654 0.4419 MEKQGAVVIVGAGPAGLATSACLNRLSIPNVVLEKDEYHAALWRKRTYDPLKLHFAEQFCHLPRMPFPSHAPTFVPRIYFMRYLDHYVSHFNIGVLYNRSVESALLGENDGKWRLTVKDTDKCQYLNGREWYNKNVLVVGSGNSGMEIAFDLSDWGANTFIVVRNPIHLLSKEMIDVGECIWITKSCSMRMEYLNVVIQITEKEKMASTVLDFREEG 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1039 217 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Glsi08g1039 217 Pfam FAD binding domain 6 42 IPR002938 GO:0071949
Glsi08g1039 217 Gene3D - 4 124 IPR036188 -
Glsi08g1039 217 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 123 178 - -
Glsi08g1039 217 Gene3D - 125 195 IPR036188 -
Glsi08g1039 217 PRINTS Pyridine nucleotide disulphide reductase class-II signature 6 28 - -
Glsi08g1039 217 PRINTS Pyridine nucleotide disulphide reductase class-II signature 131 155 - -
Glsi08g1039 217 SUPERFAMILY FAD/NAD(P)-binding domain 7 168 IPR036188 -
Glsi08g1039 217 PRINTS FAD-dependent pyridine nucleotide reductase signature 7 26 - -
Glsi08g1039 217 PRINTS FAD-dependent pyridine nucleotide reductase signature 135 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1039 Glsi-ChrGlsi08 7639346 7640792 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1039 08 7639346 7640792 Glsi08g1039 08 7639346 7640792 ECH