Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1031 ATGGCCCTCGAGAACTGTTTACGAGTGACTACAATGGGTATGGCCAGACCCCAATGCCTTCATCCACTTTCTTCAAAGGAAAAGCTTGTTTTCCCCAGTTTCACAGGATTCAAGAAATCCATGTCAAAATCCACAGTATCAAACCCCTCTCTTAAATCAACCGCTGGTAACTACAGAAAATCCCGTTTTATCTGCAATGCTCGTGAAGCAGTTAATGAAGTTCGGGTAGTGACGGATTCTACCTGGAATAACCTTGTAATAGCAAGTAAAACCCCTGTGCTGGTGGAGTTTTGGGCACCATGGTGTGGTCCGTGCAGGATGATAGCCCCTGTGATTGATGAATTGGCAAAAGAATATGGTGATAAAATTGCATGCTACAAGCTTAACACCGATGACTGTCCAAACATACCCACACAATACGGAATCAGGAGCATACCAACAGTTCTATTCTTCAAAAATGGTGAGAAAAAAGAAAGCGTCATTGGTGCAGTTCCCAAGTCCACCTTGTCCGCAACAGTAGAAAAATATGTAGATGCCTAA 540 0.4333 MALENCLRVTTMGMARPQCLHPLSSKEKLVFPSFTGFKKSMSKSTVSNPSLKSTAGNYRKSRFICNAREAVNEVRVVTDSTWNNLVIASKTPVLVEFWAPWCGPCRMIAPVIDELAKEYGDKIACYKLNTDDCPNIPTQYGIRSIPTVLFFKNGEKKESVIGAVPKSTLSATVEKYVDA 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1031 179 ProSitePatterns Thioredoxin family active site. 94 112 IPR017937 -
Glsi08g1031 179 Gene3D Glutaredoxin 74 178 - -
Glsi08g1031 179 SUPERFAMILY Thioredoxin-like 63 178 IPR036249 -
Glsi08g1031 179 Pfam Thioredoxin 74 174 IPR013766 -
Glsi08g1031 179 PANTHER GEO12009P1 60 177 - -
Glsi08g1031 179 NCBIfam thioredoxin 78 176 IPR005746 GO:0015035
Glsi08g1031 179 CDD TRX_family 80 174 - -
Glsi08g1031 179 PRINTS Thioredoxin family signature 93 101 - -
Glsi08g1031 179 PRINTS Thioredoxin family signature 101 110 - -
Glsi08g1031 179 PRINTS Thioredoxin family signature 141 152 - -
Glsi08g1031 179 ProSiteProfiles Thioredoxin domain profile. 40 179 IPR013766 -
Glsi08g1031 179 FunFam Thioredoxin 68 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1031 Glsi-ChrGlsi08 7589565 7590493 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1031 08 7589565 7590493 Glsi08g1031 08 7589565 7590493 ECH