Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1007 ATGTACCACCCCGCTGCGTCATCGTCTCCGGCCACCCACCAGATGTACGGCTCGCCTATGTACCCAAAGATCGGTCAGCACGGTCATACTGCCGTCCCTCCCGTCGGCCGTCCGTCGCCGCATTTCCAGACTTCTTCTCATTCCTCTTCTTCAGGATTGGGCATTAAGGTCGCTTTAAAGCCAGAATATAGGATCACTCCGCCGCCTCATTTATCACCTCAGGCTGGAGATATACCACGGAGCAACTTCCAATTTGATTTTGAATTAGAGAGAAAAATTTTGGCTGAAGCTGAGAAGGAAAGCCCAAATTGGAGTAGATTTGGGATGGAAAATCTTCCAACTAAGGAAGCTGAACCAACCTCACGAATGGTTCCTGTTTCCGATCCCATTGTGAGCAAATATATTGCCTTGGGGCTCAGCCGAGAAGCTGTTCCCATTGCTGTTGCAAATTTTGGTGATAATGCGACCAAGGTTGGGGAATTTGTCAAAGGCTACGCGCTTCTGCGCGAAATGGGATTTTCATCCAGCGCCGTTGCTGAAGCCTTGGTTATGTTTGACAATGATACGGACAAGGCACTAGCACATTTCCTTAGCGGCTCATCATGA 606 0.4917 MYHPAASSSPATHQMYGSPMYPKIGQHGHTAVPPVGRPSPHFQTSSHSSSSGLGIKVALKPEYRITPPPHLSPQAGDIPRSNFQFDFELERKILAEAEKESPNWSRFGMENLPTKEAEPTSRMVPVSDPIVSKYIALGLSREAVPIAVANFGDNATKVGEFVKGYALLREMGFSSSAVAEALVMFDNDTDKALAHFLSGSS 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1007 201 CDD UBA2_UBAP1_like 161 197 - -
Glsi08g1007 201 SUPERFAMILY UBA-like 166 199 IPR009060 GO:0005515
Glsi08g1007 201 PANTHER LD44032P 18 199 IPR038870 GO:0000813|GO:0043130|GO:0043162
Glsi08g1007 201 FunFam Ubiquitin-associated/translation elongation factor EF1B protein 123 200 - -
Glsi08g1007 201 MobiDBLite consensus disorder prediction 1 52 - -
Glsi08g1007 201 Gene3D UBAP1 SOUBA domain 125 201 IPR042575 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1007 Glsi-ChrGlsi08 7453657 7457564 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1007 08 7453657 7457564 Glsi08g1007 08 7453657 7457564 ECH