Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0996 ATGGTGGATTCGGTGCGAATCCAAAATCAATGGGTGGCGTCTGACCAAATTCCAGTAACTGAAATGGTTGGGCAAGGTTCCTTGCTGTTGGAATGCACCGGCACGGGTATCGGTAGAGATGGCAAGGAAAGCTCGTCTTCTCAGACGCAAATATCTGATTATGATAAATTGGGAGTTGGAGAACGAGCTTTCTCTGCCTCTGGCGCCGCCGTTCTCTCCGCAATCATTGTCAATCCTCTTGATGTTGCTAAGACAAGATTGCAAGCACAGGCTGCTGGGGTCCATTATTCTCATCCGCTCAGTAATATGACCAGTCGCATGGCTTATTTTGGACCAAATATGATGTTTCAAGATTTAAGATGTTCTCCATCATGCACACGGGCAGGAATCCATGGCACAGTATCAATTTGCCCTCCCGAGTGTTTTCGATATAAAGGAACACTGGATGTCCTCTACAAAATTATTCAGCAGGAAGGATTTGCAAGGCTGTGGAGAGGCACAAATGCAGGCCTGGCACTTGCAGTACCAACTGTAGGGATTTACCTTCCTTGCTATGACATATTCCGCAACTGGTTGGAGGAATTTGCAACCAAAAATGTTCCATTCACAACTCCATATGTGCCTTTAGTGGCTGGCTCATTGGCACGCTCTTTAGCTTGTGCAACTTGTTATCCTATTGAGCTTGCTAGAACTCGCATGCAGGCATTTAAAGAGACTCAAATTGGTAGAAAGCCTCCTGGAGTGTTCCAGACTCTGCTAGGTGTTGTCTCACATGTCAAGAGCACAAATAGTCTACAGAACAGATTGCAAAGTTACCGTGTTCTGTGGACTGGCATGGGTTCTCAACTTGCCCGTGATGTACCGTTCTCTGCTATTTGCTGGTCAACCCTTGAACCGATAAGAGGAAAACTACTTAATCTGGTTGGAGGTGATGATGCCAATGCTATGGGTGTCCTGGGTGCAAATTTTTCGGCTGGTTTTATTGCAGGAACCCTTGCGGCTGGTGCTACATGTCCACTAGATGTTGCGAAAACTCGAAGGCAGATAGAGAGGGATCCGTCAAGGGCATTGACAATGACTACAAGACAGACACTAAGGGAGGTTTGGAGAGATGGAGGCTTGAAGGGACTGTTTACAGGTGTTGGTCCGCGAGTTGGTCGAGCAGGGCCCTCAGTTGGGATTGTGGTTTCGTTTTATGAAGTTGTAAAGTTTGTTCTACATCACCAGTACGCAGCATCTTGA 1242 0.4678 MVDSVRIQNQWVASDQIPVTEMVGQGSLLLECTGTGIGRDGKESSSSQTQISDYDKLGVGERAFSASGAAVLSAIIVNPLDVAKTRLQAQAAGVHYSHPLSNMTSRMAYFGPNMMFQDLRCSPSCTRAGIHGTVSICPPECFRYKGTLDVLYKIIQQEGFARLWRGTNAGLALAVPTVGIYLPCYDIFRNWLEEFATKNVPFTTPYVPLVAGSLARSLACATCYPIELARTRMQAFKETQIGRKPPGVFQTLLGVVSHVKSTNSLQNRLQSYRVLWTGMGSQLARDVPFSAICWSTLEPIRGKLLNLVGGDDANAMGVLGANFSAGFIAGTLAAGATCPLDVAKTRRQIERDPSRALTMTTRQTLREVWRDGGLKGLFTGVGPRVGRAGPSVGIVVSFYEVVKFVLHHQYAAS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0996 413 Gene3D Mitochondrial carrier domain 38 137 IPR023395 -
Glsi08g0996 413 ProSiteProfiles Solute carrier (Solcar) repeat profile. 57 191 IPR018108 -
Glsi08g0996 413 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 303 IPR018108 -
Glsi08g0996 413 Pfam Mitochondrial carrier protein 57 193 IPR018108 -
Glsi08g0996 413 Pfam Mitochondrial carrier protein 321 407 IPR018108 -
Glsi08g0996 413 Pfam Mitochondrial carrier protein 206 302 IPR018108 -
Glsi08g0996 413 PANTHER FI19922P1-RELATED 45 409 IPR045315 GO:1990542
Glsi08g0996 413 SUPERFAMILY Mitochondrial carrier 61 401 IPR023395 -
Glsi08g0996 413 Gene3D Mitochondrial carrier domain 138 410 IPR023395 -
Glsi08g0996 413 ProSiteProfiles Solute carrier (Solcar) repeat profile. 317 405 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0996 Glsi-ChrGlsi08 7365683 7370494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0996 153 404 Organic Solute Cotransporters AT3G55640 25.856 4.01e-17 80.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0996 08 7365683 7370494 Glsi08g0996 08 7365683 7370494 ECH