Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0960 ATGTTGTTATCCCTGAACTTCTTGTTCCTTTCCATAAGTAGTTCTTGGACTATAGTTGAACATGTCAACTCATATCTTGTAACCATGATGAAAGCCAAACCACCGGGTTATGAGGAACCCACTGTTCTTGCTGCTGAGACACCTTCTCATCTTTCCATCCAGGAAGAATTCCAGCTGGCACTCTTCAGGATTAGAAACGAGAAATCTGTTTGCAGACAGTTGTATGATCTGAGGCAGACATGGCATATTGAAAGAGTGGAGACATTTAGTGATGCTGATACAAAAGGTGAAGGAAGAATTGATAAAGACGAATGGAAAGCATTTGTGTCAAAAAGTCCATCGTTGATAAAGAACATTACCCTTCCGTATTTGAAGGATATAACGTTGGCATTCCCCAGTTTTGTCGTAAGAGCAAAAGTTGAAGACTCCGAGGAGCAGAATGGTCTGAATAAAGCAGCAGCCGTTCCATTTGCTGATTCAACAGTAGCAGTTGGTTCAATAGTAGTAGTAGCAGGGGTACAGAGGGAAATTTAG 534 0.4139 MLLSLNFLFLSISSSWTIVEHVNSYLVTMMKAKPPGYEEPTVLAAETPSHLSIQEEFQLALFRIRNEKSVCRQLYDLRQTWHIERVETFSDADTKGEGRIDKDEWKAFVSKSPSLIKNITLPYLKDITLAFPSFVVRAKVEDSEEQNGLNKAAAVPFADSTVAVGSIVVVAGVQREI 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0960 177 Gene3D - 53 143 - -
Glsi08g0960 177 ProSiteProfiles EF-hand calcium-binding domain profile. 87 115 IPR002048 GO:0005509
Glsi08g0960 177 PANTHER CALCINEURIN B 87 143 IPR045198 GO:0005509|GO:0019722|GO:0019900
Glsi08g0960 177 SUPERFAMILY EF-hand 70 134 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0960 Glsi-ChrGlsi08 7074497 7076825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0960 54 147 EF-hand Containing Proteins AT5G24270 36.420 9.27e-22 85.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0960 08 7074497 7076825 Glsi08g0960 08 7074497 7076825 ECH