Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0954 ATGGTTTCAAATCCGAACTTCATCTATTATGCCTGCATTGCAAAAGGAACAACAATTCTCGCCCAACACATGTCCAAAGAACCAAAGATCGAAGAATTAGCTGCAGAATGCCTTGCGCAAGCTCCTCTCCACCATTCTATGTTTTCTCACACTGTGAGGCAACGGACCTATACGTTCTTGATTGATGACCCTTTTGTCTATTTCGCAATTTTCGATGAAGAGCTTGTGAAATCCGAGGCTTTTTGGTTTTTAAATCGCACGAAGTGCGCATTTGATGAGATATTTGAAGGAGGGTCTATCACGGGTTCTGATGATTTCGCGCCGCTTTGTTTTCAAGCTCAATTCGATTCCATCTTTTGTGAAATAACGCCTTCGGATTTGGACTCGAAAAATCCATTGCGGAGCGAAAACAAGGATGACCAAAACTCAAGCTTTAATTCAGTGAAAGGGAAGAGATCGGTGATAGCACCTTTGCTTGGGAAGCCTATTAAGAGGGTGAGTAGGGAATCCAATGGAATGGATGGTAAAGATAGTGTAACGGAGAATAAATTGGATGTATGTGATGATATAAATGGTTTCTCCGGAGATTTTGCATTGTCGGCAACAAAGGGCAACGATCGACAAAAAGCAAAGCAAATATGGAAGAAACATGTGTGGGTGGTGCTGTTGCTGGACGTGTTTGTCTGCGCAACGTTATTTGTAATTTGGTTATGGGTTTGCAGAGGGTTTAAGTGCATGCAGACTTGA 747 0.423 MVSNPNFIYYACIAKGTTILAQHMSKEPKIEELAAECLAQAPLHHSMFSHTVRQRTYTFLIDDPFVYFAIFDEELVKSEAFWFLNRTKCAFDEIFEGGSITGSDDFAPLCFQAQFDSIFCEITPSDLDSKNPLRSENKDDQNSSFNSVKGKRSVIAPLLGKPIKRVSRESNGMDGKDSVTENKLDVCDDINGFSGDFALSATKGNDRQKAKQIWKKHVWVVLLLDVFVCATLFVIWLWVCRGFKCMQT 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0954 248 Gene3D Longin domain 2 125 - -
Glsi08g0954 248 SUPERFAMILY SNARE-like 8 105 IPR011012 -
Glsi08g0954 248 PANTHER PHYTOLONGIN PHYL1.2 1 246 IPR044783 GO:0016020
Glsi08g0954 248 CDD Longin 9 122 IPR010908 -
Glsi08g0954 248 ProSiteProfiles Longin domain profile. 50 119 IPR010908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0954 Glsi-ChrGlsi08 7032205 7032951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0954 8 245 Miscellaneous Gene Families AT3G54300 23.077 1.70e-18 80.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0954 08 7032205 7032951 Glsi08g0954 08 7032205 7032951 ECH