Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0943 ATGGGTGAGTGGCAGTCACTCCTCCAATCCATTTTCCTTGGCCTCATTTTCTCTTTCCTCCTTGCAAAGCTCATCTCCGTCGTCGTATCATTCAAGGACGATAATCTGACTATTACTCGCAGCAGCACCGACCATAAAAGCGATCGGAGCAGAATAGAATCCGATGCCGACCCGTTTGAGTGCAGGTCTGCTCCCGATGCTGGCGAGCACCACGACACTGACTCGGTCATGGCCGAGCAGGGCAGTGTGGGAAAGGAAAGTGTAGAGGGTGATAACGACTATGACGATGATTGGGAGGGTGTGGAAAGTACGGAATTGGACGAGGCCTTCAGTGCCGCCACAGCTTTCGTGGCTGCTGCCGCTGCCGATCGGCTCTCGCAGAAGGTGTCAACTGATGTGCAACTCCAGCTTTATGGGCTGTACAAGATTGCCACCGAAGGGCCCTGTAGTACGCCTCAGCCGTCGGCACTGAAAATGACGGCTCGAGCCAAATGGCAAGCATGGCAGAAAATGGGTGCTATGCCTCCTGAAGACGCAATGCAGAAGTACATTGATATTGTGACAGAGCTATATCCTACTTGGTTAGATGGTTCAGCTTTGAGGAGCAAAAGTGGTGATGGTGTTGGCCCAAGCTCGGAGTCTAAGGGAGCAATGGGACCAGTATTCAGCACTTTCGTGTATGAAGAGGAAGCTGGCAGTGATTTGAAAATGGATGCAGTTCATGTATTTTCCAGAGAAGGAGACGTGACTAATCTGCTCAAGTGTATTGAAAATGGTGTTTCTGTGAATGTGAAGGACAGTGAGGGTCGGACACCATTACATTGGGCTGTGGATCGTGGCCACCTTGAAGTCATAGAACTGCTTGTTAGTAGGAATGCTGATGTAAATGCCAAGGATAATGATGGACAAACTCCATTGCATTATGCTGTTGTGTGTGATAGAGAAGCCATAGCTGAGTATTTAGTGAAGCATAATGGAGACACAGATTTGAAGGATAACGATGGCAGTTCCCCGCTTGACATCTGCGAGTCAAACTGGCCTTGCATGCAAGGTGTGGGGAAGTAA 1065 0.4948 MGEWQSLLQSIFLGLIFSFLLAKLISVVVSFKDDNLTITRSSTDHKSDRSRIESDADPFECRSAPDAGEHHDTDSVMAEQGSVGKESVEGDNDYDDDWEGVESTELDEAFSAATAFVAAAAADRLSQKVSTDVQLQLYGLYKIATEGPCSTPQPSALKMTARAKWQAWQKMGAMPPEDAMQKYIDIVTELYPTWLDGSALRSKSGDGVGPSSESKGAMGPVFSTFVYEEEAGSDLKMDAVHVFSREGDVTNLLKCIENGVSVNVKDSEGRTPLHWAVDRGHLEVIELLVSRNADVNAKDNDGQTPLHYAVVCDREAIAEYLVKHNGDTDLKDNDGSSPLDICESNWPCMQGVGK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0943 354 MobiDBLite consensus disorder prediction 40 95 - -
Glsi08g0943 354 Gene3D - 100 210 IPR014352 -
Glsi08g0943 354 ProSiteProfiles Ankyrin repeat region circular profile. 268 300 - -
Glsi08g0943 354 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 106 196 IPR000582 GO:0000062
Glsi08g0943 354 PRINTS Acyl-coA-binding protein signature 173 190 IPR000582 GO:0000062
Glsi08g0943 354 PRINTS Acyl-coA-binding protein signature 129 147 IPR000582 GO:0000062
Glsi08g0943 354 PRINTS Acyl-coA-binding protein signature 152 167 IPR000582 GO:0000062
Glsi08g0943 354 ProSiteProfiles Ankyrin repeat region circular profile. 301 333 - -
Glsi08g0943 354 SUPERFAMILY Acyl-CoA binding protein 105 195 IPR035984 GO:0000062
Glsi08g0943 354 Gene3D - 227 346 IPR036770 -
Glsi08g0943 354 SUPERFAMILY Ankyrin repeat 237 344 IPR036770 -
Glsi08g0943 354 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6 2 346 - -
Glsi08g0943 354 SMART ANK_2a 235 264 IPR002110 GO:0005515
Glsi08g0943 354 SMART ANK_2a 301 330 IPR002110 GO:0005515
Glsi08g0943 354 SMART ANK_2a 268 297 IPR002110 GO:0005515
Glsi08g0943 354 ProSiteProfiles Ankyrin repeat profile. 268 300 IPR002110 GO:0005515
Glsi08g0943 354 Pfam Ankyrin repeats (3 copies) 246 332 IPR002110 GO:0005515
Glsi08g0943 354 PRINTS Ankyrin repeat signature 317 331 IPR002110 GO:0005515
Glsi08g0943 354 PRINTS Ankyrin repeat signature 269 284 IPR002110 GO:0005515
Glsi08g0943 354 ProSiteProfiles Ankyrin repeat profile. 301 333 IPR002110 GO:0005515
Glsi08g0943 354 MobiDBLite consensus disorder prediction 40 76 - -
Glsi08g0943 354 Pfam Acyl CoA binding protein 107 187 IPR000582 GO:0000062
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0943 Glsi-ChrGlsi08 6959632 6963157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0943 1 350 Acyl Lipid Metabolism Gene Families AT5G53470 62.890 2.36e-149 422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0943 08 6959632 6963157 Glsi08g0943 08 6959632 6963157 ECH