Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0899 ATGTCTCAAATCACAATAAAATCTCCAAAGCACTGTGCTCACAAGCAAGGACTGAAGATTGAAAGGAATTACAAGAAGCTCTTCTTTGCTTTCTCTTCATTTTTCACTGCAATTCTGTTACTAATACTTGTTATCTGGATCATCCTCCGTCCTTCCAAGCCTCAATTCTCCCTCCAACAAGTTGATATCTACCAACTCAATCTGTCAGGGCCTCACCTCAACTCATCCATCCAACTCACTCTGCTCTCCAAGAACCCAAATCAGAAAGTCGGCATTTACTATGACGAGTTTCAAGTTTATGCAACGTACAAGAGCCAGCAGATAACCGTTGATACCTCTCTGACTCCGTTCTACCAGGACCATGAAGAGAGCAACCTCTTAACGGCCTCTTTGGTCGGAAATGGGCTACCTGTGGCTCCTTCCCTTGCTTATGAAATGGGTCATGATCAAATAGCCGGAAGACTCATTTTGAATCTCAAAATCAACGGAAGGCTCAGGTGGAAAGTGGCAACCTGGGTCTCTGGGCGTTACAGGTTGAATGTTAATTGTGTTTCAGTCATGGCCTTTGGACCCTCTATGACTGCAGGTCCTCTCACTTCTAAGCAGGGGACTCAGTGTTCTACCACAATTTAA 633 0.4455 MSQITIKSPKHCAHKQGLKIERNYKKLFFAFSSFFTAILLLILVIWIILRPSKPQFSLQQVDIYQLNLSGPHLNSSIQLTLLSKNPNQKVGIYYDEFQVYATYKSQQITVDTSLTPFYQDHEESNLLTASLVGNGLPVAPSLAYEMGHDQIAGRLILNLKINGRLRWKVATWVSGRYRLNVNCVSVMAFGPSMTAGPLTSKQGTQCSTTI 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0899 210 Pfam Late embryogenesis abundant protein 80 183 IPR004864 -
Glsi08g0899 210 PANTHER OS05G0367900 PROTEIN 24 197 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0899 Glsi-ChrGlsi08 6675660 6676292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0899 27 183 EF-hand Containing Proteins AT5G21130 22.360 1.15e-08 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0899 08 6675660 6676292 Glsi08g0899 08 6675660 6676292 ECH