Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0891 ATGTCTCCAGGTCCCGTTGTTGAGGCCGCCGCTGAGGAACAAGCTCTTTCCGCTGAGGAGACTCAGAAGAAGAATTATCAGGCGCAGGACGAGGACGACGTTCCCGTTGTTGAAGATGTGAAGGATGATGAAAAAGATGACGACGATGATGATGTGGACGACGACGACGACGACGATGATGAGAAGGAAGATGGTGCTCAAGGTGCTACTGAGGGTTCAAAGCAGAGCAGAAGTGAGAAGAAGAGTCGGAAAGCAATGTTGAAGCTGGGACTGAAACCTGTTACTGGTGTTAGTAGGGTCACAATCAAGAGAACAAAAAATATTCTTTTTTTCATCTCAAAACCTGATGTCTTCAAGAGTCCTAATTCCGAGACCTATGTCATATTTGGGGAGGCCAAAATAGAGGATTTGAGCTCACAGTTGCAGACACAAGCTGCTCAACAGTTTAGGATGCCAGATATGGGATCCGTGATGGCAAAACCAGATTCTGCTGCTGCAGCTGCTCCAGGAACACAGCCTGAGGAGGAGGAAGAGGAGGTTGATGAAACTGGGGTGGAGCCTCGAGATATCGATTTGGTTATGACACAGGCAGGAGTTTCAAGAAGCAAGGCCGTAAAGGCTCTCAAGACTCACAACGGGGACATTGTTGGTGCCATCATGGAGCTCACTACTTAA 675 0.4815 MSPGPVVEAAAEEQALSAEETQKKNYQAQDEDDVPVVEDVKDDEKDDDDDDVDDDDDDDDEKEDGAQGATEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSVMAKPDSAAAAAPGTQPEEEEEEVDETGVEPRDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0891 224 CDD UBA_NAC_euk 187 223 - -
Glsi08g0891 224 Coils Coil 9 29 - -
Glsi08g0891 224 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 12 223 IPR016641 GO:0005854
Glsi08g0891 224 MobiDBLite consensus disorder prediction 1 86 - -
Glsi08g0891 224 MobiDBLite consensus disorder prediction 32 65 - -
Glsi08g0891 224 Gene3D - 85 138 IPR038187 -
Glsi08g0891 224 FunFam Putative nascent polypeptide-associated complex subunit alpha 185 222 - -
Glsi08g0891 224 Pfam HYPK UBA domain 184 223 IPR044034 -
Glsi08g0891 224 MobiDBLite consensus disorder prediction 159 189 - -
Glsi08g0891 224 ProSiteProfiles NAC A/B domain profile. 76 141 IPR002715 -
Glsi08g0891 224 Pfam NAC domain 79 134 IPR002715 -
Glsi08g0891 224 Gene3D - 185 222 - -
Glsi08g0891 224 SMART NAC_2 79 135 IPR002715 -
Glsi08g0891 224 FunFam Nascent polypeptide-associated complex (NAC), alpha subunit 86 138 - -
Glsi08g0891 224 CDD NAC_NACA 90 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0891 Glsi-ChrGlsi08 6608968 6610824 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0891 08 6608968 6610824 Glsi08g0891 08 6608968 6610824 ECH