Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0876 ATGGGTTTCAATAGAGATGAAGATTCAGGTACCCAGGTACCAACCAATACCGAAATTTCGTCCCATTTCAGGTATAATTCACCGGTTGTCCAAATTATCCTTATTGGGTTGGTTTGCTTTTGCTGCCCCGGCATGTTCAATGCCCTCTCTGGAATGGGTGGTGGTGGCCAAGTCGATCACACTGCCTCCAACAATTCCCTCACTGCCCTTTACACCACCTTCGCCATTTTTGGCATCCTTGGTGGTGGCATCTACAACATCCTCGGTCCCCACCTCACGCTTTTTGCTGGTTGCTCCACCTATGTCCTCTACTCTGGTTCCTTCCTTTACTACAACCATCACCACCACCAAGCCTTCGCTATAGTTGCCGGTGCCCTTCTTGGTGTGGGTGCAGGGCTCTTATGGGCTGCCCAGGGTGCTATTATGACCTCATATCCTCCAGTGAATCGCAAAGGGACTTATATTTCCATTTTCTGGAGTATCTTCAACATGGGTGGGGTGATTGGTGGCCTAATTCCTTTTATTCTGAATTACAATCGCGGCGAGGCTGCTTCTGTCAATGATGCAACCTACATAGGCTTCATGTGCTTCATGGCAGCCGGGACCATTTTGTCATTGGCTATCTTGCCACCTAGTAAGGTTGTTCGCGATGATGGGACCAGGTGTACCAGTATCTTGTACTCGAATATATCCACTGAGGTATTTGAGATTCTAAAGCTGCTCGTCAACTGGAAAATGCTTCTCATTTTTCCTGCTGCTTGGTCTAGCAATTTCTTCTACACCTACCAATTCAATAATGTCAATGGGGCACTGTTCAATTTGAGAACTAGAGGGTGGAACAATGTGTTCTATTGGGGAGCACAGATGCTGGGCTCAGTTGGGATGGGATACATAATGGATTTCAGTTGTAAGAGCAGGAGGAAGAGAGGGTTTGTGGGAATTGGAGTGGTTACTCTTCTTGGGTCTGCTATATGGGGTGGTGGGCTTGCTAATCAGCTTAGGTACTCCCAAAATGAATTGCCGGAGAAATTGGATTTCAAGGACTCGGGATCTGACTTTGCTGGGCCGTTTGTGTTGTATTTTTGTTTTGGATTGCTAGATGCCATGTTCCAGAGCATGGTTTACTGGGTTATTGGAGCCCTGGCCGATGATTCTGAGATCCTTAGCAGGTACTCTGGGTTCTATAAAGGTATACAAAGTGCAGGTGCAGCAGTTGCTTGGCAAGTTGATGCGAATAAGGTGTCCTTCATGTCCCAGTTGATTTTGAATTGGGCGTTCACAACAGTGAGTTATCCATTACTGTTTGTTCTGGTTTTGTTGGCTGTGAAGGAAGACGATAAGGCTGAAAATGGCTGTGCCCAATAA 1365 0.4667 MGFNRDEDSGTQVPTNTEISSHFRYNSPVVQIILIGLVCFCCPGMFNALSGMGGGGQVDHTASNNSLTALYTTFAIFGILGGGIYNILGPHLTLFAGCSTYVLYSGSFLYYNHHHHQAFAIVAGALLGVGAGLLWAAQGAIMTSYPPVNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRGEAASVNDATYIGFMCFMAAGTILSLAILPPSKVVRDDGTRCTSILYSNISTEVFEILKLLVNWKMLLIFPAAWSSNFFYTYQFNNVNGALFNLRTRGWNNVFYWGAQMLGSVGMGYIMDFSCKSRRKRGFVGIGVVTLLGSAIWGGGLANQLRYSQNELPEKLDFKDSGSDFAGPFVLYFCFGLLDAMFQSMVYWVIGALADDSEILSRYSGFYKGIQSAGAAVAWQVDANKVSFMSQLILNWAFTTVSYPLLFVLVLLAVKEDDKAENGCAQ 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0876 454 Pfam Ion channel regulatory protein UNC-93 56 252 IPR010291 -
Glsi08g0876 454 SUPERFAMILY MFS general substrate transporter 31 444 IPR036259 -
Glsi08g0876 454 PANTHER ET TRANSLATION PRODUCT-RELATED 30 447 - -
Glsi08g0876 454 CDD MFS_unc93-like 30 432 - -
Glsi08g0876 454 Gene3D MFS general substrate transporter like domains 28 216 IPR036259 -
Glsi08g0876 454 Gene3D MFS general substrate transporter like domains 241 450 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0876 Glsi-ChrGlsi08 6533321 6534825 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g1438 10 9696340 9698182 Glsi08g0876 08 6533321 6534825 CCT
Glsi08g0876 08 6533321 6534825 Glsi08g0876 08 6533321 6534825 ECH