Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0868 ATGGAGCAAGGGAAGCCGGGAGTGATGGTAGCGAAGCCTCACCATCTTCAGAACCCCATAGAGCAGTTCCAAACACGTTTCAAAGAGCTAGAGAATGGCTTCAGGCTCTGGCTCTCCAAGCAGTCTTTGCCCGTCGAGGCTGCCGTCGTCACCGCCACCAGCGCCGCCCAAGGTGCTGCTATTGGTGCCTTCATGGGCACTCTCACTAGCGATGCCTCCTCCTCTTTTCCCACTCCTCCGCCTCAGGCTTCTCTCGACCCTCAAGCCATGGCCTCTCTTAAGCAAGCTCAGGCTCTTTCTGGAGGTCCTTTGGTACAAGCTCGCAACTTTGCTGTCATGACAGGAGTGAATGCTGGTATTTCCTGCATCTTGAAAAGATTGAGGGGGAAGGAAGATGTCCAGTCCAGTATGGTGGCGGCATTTGGTTCTGGGGCTATGTTTTCATTGGTAAGTGGTATGGGTGGACCAAATCAAGTTGCAAATGCTGCTACTTCTGGACTTTTCTTTGCACTTGTTCAAGGTGGACTTTTCCAGTTAGGACAAAAGTTTTCTCAACCACCAGTTGAAGATATTCGCTATGTTAAAGCGAGACACATGTTGCATAACCTTGGCCTTCAGAGTTATGAGAAGAATTTTAAGAGAGGCTTATTAACAGACAACACTTTGCCTTTGCTCACAGACAGTGCTCTGAGAGATGTGAAAATCCCCCCTGGACCTAGACTTTTGATTCTTGATCACATCCAGAGGGACCCAGATTTGGGAGAGAAGCGATTTAGTACGGCGTTGAGTGGTGACCCACCTGACGTAATTGACGTATCCCATATGCTTGGATGCCATTGGCATGTGGGCATCGTCATGTTGGGTTTCCACGAAGCAGAAAAATTTCCAGCTAGCGTAAATGAGATCACAAACACTTTCGTGCTCCCATCAGATTTTTTTTATTAA 945 0.4847 MEQGKPGVMVAKPHHLQNPIEQFQTRFKELENGFRLWLSKQSLPVEAAVVTATSAAQGAAIGAFMGTLTSDASSSFPTPPPQASLDPQAMASLKQAQALSGGPLVQARNFAVMTGVNAGISCILKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAATSGLFFALVQGGLFQLGQKFSQPPVEDIRYVKARHMLHNLGLQSYEKNFKRGLLTDNTLPLLTDSALRDVKIPPGPRLLILDHIQRDPDLGEKRFSTALSGDPPDVIDVSHMLGCHWHVGIVMLGFHEAEKFPASVNEITNTFVLPSDFFY 314
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0868 314 Gene3D - 197 254 IPR013761 -
Glsi08g0868 314 Pfam SAM domain (Sterile alpha motif) 200 249 IPR001660 GO:0005515
Glsi08g0868 314 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 15 236 IPR039175 GO:0042721|GO:0045039
Glsi08g0868 314 SUPERFAMILY SAM/Pointed domain 196 250 IPR013761 -
Glsi08g0868 314 CDD SAM_superfamily 198 249 - -
Glsi08g0868 314 Pfam Tim17/Tim22/Tim23/Pmp24 family 48 169 - -
Glsi08g0868 314 FunFam mitochondrial import inner membrane translocase subunit TIM22-like 197 256 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi08g0868 Glsi-ChrGlsi08 6489059 6496979 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0868 08 6489059 6496979 Glsi08g0868 08 6489059 6496979 ECH