Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0517 ATGGCTGATCATCATCAGAGAATTCATCCTGTTTATGATTTGGAGGCACCGCACACACCCACAGCACCTCTGGTGCCAAGAGACATATCTAAATCCGATAAGGGCGAGCCAGTGGAGGCACACCATGCCCCTCCTGTGCAGCCGGTTGTGCATCCCAAGCCACCAAAGAAAAGAAGAAGCTGCTGCTGCAAGTTCCTTTGCTGGACCATAAGCCTTCTGCTGATTCTAATAGTTGCAATTGGCATAACTATTGGTATACTCTTCCTTGTGTTTAGACCAAAGATTCCCAAATACTCAGTGGATGGATTGAGAGTAAGCCAGTACAACCTTTCTGGAGATAACCTATCTGTCACCTTCAACGTGACAGTCACTGCCAGAAACCCAAACAAGAGGATTGGAATATACTATGTGAAAGGAAGCCATGTGAGTGCTTGGTACAAGGAGACAAAACTCTGTGAAGGGTCCTTGCCAATATTCTATCAGGGTCACCACAACACTACGGTGATTTATCTGCCTCTTTCTGGGCAAACACAGAATGCAACTGGTCTACAAAGTACCTTGCAGCAGCAGCTACAACAGACGGGGAATGTTCCCCTGACTCTTAAGGCCAAACAGCCTGTGAGGGTCAAGCTTGGTAAGTTGAAGCTGTTCAAGGTGAAGTTCAGGGTTAGGTGCACGCTAGTGGTGAATAGCCTTGCTGCTAATAATGAAATTAGACTTCAGAGTAGTAGCTGTAAGTTCAAGTTTAGGCTATGA 756 0.4616 MADHHQRIHPVYDLEAPHTPTAPLVPRDISKSDKGEPVEAHHAPPVQPVVHPKPPKKRRSCCCKFLCWTISLLLILIVAIGITIGILFLVFRPKIPKYSVDGLRVSQYNLSGDNLSVTFNVTVTARNPNKRIGIYYVKGSHVSAWYKETKLCEGSLPIFYQGHHNTTVIYLPLSGQTQNATGLQSTLQQQLQQTGNVPLTLKAKQPVRVKLGKLKLFKVKFRVRCTLVVNSLAANNEIRLQSSSCKFKFRL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0517 251 Gene3D - 89 232 - -
Glsi08g0517 251 MobiDBLite consensus disorder prediction 16 56 - -
Glsi08g0517 251 Pfam Late embryogenesis abundant protein 122 226 IPR004864 -
Glsi08g0517 251 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 31 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0517 Glsi-ChrGlsi08 4316509 4317264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0517 56 242 EF-hand Containing Proteins AT5G21130 31.414 4.51e-29 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0517 08 4316509 4317264 Glsi08g0517 08 4316509 4317264 ECH