Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0212 ATGGGAGAGAAAAGGGTGGGAGAAGAGAGGGAAGAAGAAGTTCCGCCATTACTGTTTGAGACAAAGGAAGGAAGACGGAGAGGAGCTTACAAGGTGCTTTCATGCACAATATTTGTAGGTATTTGTTTGATATGGGTTTATAGATTAACAAAGATGCCTAGAGCAGGAGAGAGCGGTAGATGGGCATGGATTGCTGTGTTCTTGTCTGAACTGTGTTTCGGATTCTTCTGGATTCTCACTCAGTCTCACCGTTGGAGGATTCTCTATTATTCTCCCTTCAAACAAAGGCTCTTTCACAGATATGGTGAAGAGAAGTTACCAGGAGTGGACATTTTTGTGTGCACAGCAGACCCATATCTAGAGCCTCCAATTATGGTGATGAACACAGTTTTATCAGCCATGTCCTGCAATTATACTTCAAATAAGTTGAGTGTTTATCTTTCTGATGATGGAGGTTCTGAGCTCACCTTCTTTGCTCTTCTCAAAGCCTCTATTTTCTCCAAGCATTGGATACCCTTCTGCAGAAGATTCAACATTCAATCCATATCACCTGAGGCTTACTTTTCCCAACATTCTGCAGCTACCATTGAGAATGGCCAAGAATGCTCTTCTATTAAGAAATTATATGAAGACATGAAAAGTGAGATTGAATCGGCCGTAGAAAAGGGCAAGCTTCCAGATGATGCAAGGAACCAACACAAAGGATTTTCAGAATGGAATTCCAAAACCACAAAGCAGGACCATCAGTCCATTGTGCAGATCATAATTGATGGAAGGGACACAAATGCTGTAGACGATGATGGATTTCAGTTGCCAACACTAGTTTATGTGGCACGAGAGAAGAGACCCGATTTCCCCCACCACTTCAAAGCTGGAGCCATGAATGCACTGATAAGAGTGTCATCAGAGATGAGCAATGCACCAGTAATCCTCAACTTGGACTGTGACATGTACGTAAACAATGCAGATATAATACAAGAAGCACTGTGTTTCTTCATGGACGAAACAAGAGGCCACCAGATAGGTTTTGTGCAGTTTCCACAAAAATTCAACAATATCACCAAGAATGACTTGTATGCAAATTATTTGTGTGTGATCAATGAGATCGAGCAACCTGGCATGAATGGACAAGGAGGAGCCTTGTACTGTGGAACTGGGTGTTTCCATCGTAGAGAAAGTCTTTCAGGTACGCACTTCAAAGATAGTAGAGCAACATGGGACATCAAACCTAAGAGATCCAAAGATAAAAGAACAGTAAATGAACTGAACAAAGCATTAAAAACTCTTGCCAACTGCACCTACGAGAAGGGAACTCAGTGGGGGAAGGAGATGGGATTGGTATATGGGATTCCAGCGGAAGACGCTGTCACTGGCCTTGTGATCTCATGCAGAGGTTGGAAATCGATTTATTACAACCCAGAAAGAAAGGCTTTCTTGGGTGTAGCTCCGACAACCTTAGACGTGAATCTTGTTCAGCACAAGAGGTGGGGAGAAGGTTTGTTCCAGATTTTCTTCTCCAAGTATTGCCCATTCATTTATGGGCATAGGAAGATAAGCTTGGGACTGCAAATGGCATACTGTGCCTACCTGCTATGGGCTCCATTGTCCCTCCCAACTCTTTGCTATGCCATTGTTCCTTCCATCTGCACACTTCGTGGCATCCCCTTGTTCCCACAGCTTACAAGCCCGTGGTTCCTTCCCTTTGCATATGCATTTCTTGCCACGAATGCCTACAGTTTCTGCGAGGCTCTCAACTGTGGGAGCACAGCCAAGGGATGGTGGAACTTGCAAAGAATGAAGATCATACGAAGGACCACCTCCTACTTTTTTGGCTTCATTGACAACATCACCAAGCAACTAGGGCTATCTCAGACAAAATTTGCAGTCACAGACAAGTTTGTCTCAGAAAAGACCCTGAAAAGATATGAGCAAGAGGTCTTTGATTTTGGAAGCTCTTCAATCATGTTCACCATAATAGCAACACTGGCAATTCTGAACCTCTTCGGATTCATTGGGGGAGTCGTGAGGGTTGTGATGGATGTAGAGTTTAATAGCTCTAGCCAACTGGTTCTGCAGATTTTGCTGTGCAAATTGATGGTGATGCTGAATAAACCAGTTTATGAGGCTCTTTTCATCCGCAATGATAAAGGATGCTTGCCATCCTCAGTCTTGCTCGAGTCCATTGTTTTGGCTTTATTGGCTTGCTTCCTGGCACCTTAA 2220 0.436 MGEKRVGEEREEEVPPLLFETKEGRRRGAYKVLSCTIFVGICLIWVYRLTKMPRAGESGRWAWIAVFLSELCFGFFWILTQSHRWRILYYSPFKQRLFHRYGEEKLPGVDIFVCTADPYLEPPIMVMNTVLSAMSCNYTSNKLSVYLSDDGGSELTFFALLKASIFSKHWIPFCRRFNIQSISPEAYFSQHSAATIENGQECSSIKKLYEDMKSEIESAVEKGKLPDDARNQHKGFSEWNSKTTKQDHQSIVQIIIDGRDTNAVDDDGFQLPTLVYVAREKRPDFPHHFKAGAMNALIRVSSEMSNAPVILNLDCDMYVNNADIIQEALCFFMDETRGHQIGFVQFPQKFNNITKNDLYANYLCVINEIEQPGMNGQGGALYCGTGCFHRRESLSGTHFKDSRATWDIKPKRSKDKRTVNELNKALKTLANCTYEKGTQWGKEMGLVYGIPAEDAVTGLVISCRGWKSIYYNPERKAFLGVAPTTLDVNLVQHKRWGEGLFQIFFSKYCPFIYGHRKISLGLQMAYCAYLLWAPLSLPTLCYAIVPSICTLRGIPLFPQLTSPWFLPFAYAFLATNAYSFCEALNCGSTAKGWWNLQRMKIIRRTTSYFFGFIDNITKQLGLSQTKFAVTDKFVSEKTLKRYEQEVFDFGSSSIMFTIIATLAILNLFGFIGGVVRVVMDVEFNSSSQLVLQILLCKLMVMLNKPVYEALFIRNDKGCLPSSVLLESIVLALLACFLAP 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0212 739 SUPERFAMILY Nucleotide-diphospho-sugar transferases 124 508 IPR029044 -
Glsi08g0212 739 Pfam Cellulose synthase 109 398 IPR005150 GO:0016020|GO:0016760|GO:0030244
Glsi08g0212 739 Pfam Cellulose synthase 417 734 IPR005150 GO:0016020|GO:0016760|GO:0030244
Glsi08g0212 739 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 99 201 IPR029044 -
Glsi08g0212 739 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 240 407 IPR029044 -
Glsi08g0212 739 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 22 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0212 Glsi-ChrGlsi08 1854605 1870458 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0212 3 735 Glycosyltransferase AT1G55850 47.581 0.0 708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0212 08 1854605 1870458 Glsi08g0212 08 1854605 1870458 ECH