Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0211 ATGGGAGAGAAAAGGGTGGGAGAAGAGAGGGAAGAAGAAGTTCCGCCATTACTGTTTGAGACAAAGGAAGGAAGACGGAGAGGAGCTTACAAGGTGCTTTCATGCACAATATTTGTAGGTATTTGTTTGATATGGGTTTATAGATTAACAAAGATGCCTAGAGCAGGAGAGAGCGGTAGATGGGCATGGATTGCTGTGTTCTTGTCTGAACTGTGTTTCGGATTCTTCTGGATTCTCACTCAGTCTCACCGTTGGAGGATTCTCTATTATTCTCCCTTCAAACAAAGGCTCTTTCACAGATATGGTGAAGGGAAGTTACCAGGAGTGGACATTTTTGTGTGCACAGCAGACCCATATCTAGAGCCTCCAATTATGGTGATGAACACAGTTTTATCAGCCATGTCCAGCAATTATACTTCAAATAAGTTGAGTGTTTATCTTTCTGATGATGGAGCTACCATTGAGAATGGCCAAGAATGCTCTTCTATTAAGAAATTATATGAAGACATGAAAAGTGAGATTGAATCGGCCGTAGAAAAGGGCAAGCTTCCAGATGATGCAAGGAACCAACACAAAGGATTCTCAGAATGGAATTCCAAAACCACAAAGCAGGACCATCATTCCATTGTGCAGATCATAATTGATGGTAGGGACACAAATTCTGTAGATGAAGATGGGTTTCAGTTGCCAACACTAGTTTATGTGGCACGAGAGAAGAGACCCGATTTCCCTCACCACTTCAAAGCTGGAGCCATGAATGCACTGATAAGAGTGTCATCAGAGATAAGCAATGCACCAGTAATCCTCAACTTGGACTGTGACATGTACGTAAACAATGCAGATATAATACAAGAAGCACTGTGTTTCTTCATGGACGAAACAAGAGGCCACCAGATAGGTTTTGTGCAGTTTCCACAAGAATTCAACAATATCACCAAGAATGACTTGTATGCAAATTATTTTTGTGTGATCAATGAGATCGAGCAACCTGGCATGAATGGACAAGGAGGAGCCTTGTACTGTGGAACTGGGTGTTTCCATCGTAGAGAAAGTCTTTCAGGTACGCACTTCAAAGATAGTAGAGCAACATGGGACATCAAACCTAAGAGATCCGAAGATAAAAGAACAGTAAATGAACTGAACGAAGCATCAAAAGCTCTTGCCAATTGCACCTACGAGAAGGGAACTCAGTGGGGGAAGGAGATGGGATTGGTATATGGGATTCCGGCAGAAGACGTTGTCACTGGCCTTGTGATCTCATGCAGAGGTTGGAAATCGATTTATTACAACCCAGAAAGAAAGGCTTTCTTGGGTGTAGCTCCGACAACCTTAGACGTGAATCTTGTTCAGCACAAGAGGTGGGGAGAAGGTTTGTTCCAGATTTTCTTCTCCAAGTATTGCCCATTCTTTTATGGGCATAGGAAGATAAGCTTGGGACTGCAAATGGGATACTGTGCCTACCTGCTATGGGCTCCATTGTCCCTCCCAACTCTTTGCTATGCCATTGTTCCTTCCATCTGCACACTTCGTGGCATCCCCTTGTTCCCACAGCTTACAAGCCCGTGGTTCCTTCCCTTTGCATATGCATTTCTTGCCACGAATGCCTACAGTTTCTGCGAGGCTCTCAGCTGTGGGAGCACAGCCAAGGGATGGTGGAACTTGCAAAGAATGAAGATCATACGAAGGACCACCTCCTACTTTTTTGGCTTCATTAACAACATCACCAAGCAACTAGGGCTATCTCAGACAAAATTTGCAGTCACAGACAAGTTTGTCTCAGAACAGACCCTGAAAAGACATGAGCAAGAGGTCTTTGATTTTGGAAGCTCTTCAATCATGTTCACCATAATAGCAACACTGGCAATTCTGAACCTCTTCGGATTCATTGGGGGAGTAGTGAGGGTTGTGATGGATGTAGAGTTTAATAGCTCTAGCCAACTGGTTCTGCAGATTTTGCTGTGCAAATTGATGGTGATGCTGAATAAACCAGTTTATGAGGCCCTTTTCATCCGCAATGATAAAGGATGCTTGCCATCCTCAGTCTTGCTCGAGTCCATTGTTTTGGCTTTATTGGCTTGCTTCCTGGCACCTTAA 2094 0.4374 MGEKRVGEEREEEVPPLLFETKEGRRRGAYKVLSCTIFVGICLIWVYRLTKMPRAGESGRWAWIAVFLSELCFGFFWILTQSHRWRILYYSPFKQRLFHRYGEGKLPGVDIFVCTADPYLEPPIMVMNTVLSAMSSNYTSNKLSVYLSDDGATIENGQECSSIKKLYEDMKSEIESAVEKGKLPDDARNQHKGFSEWNSKTTKQDHHSIVQIIIDGRDTNSVDEDGFQLPTLVYVAREKRPDFPHHFKAGAMNALIRVSSEISNAPVILNLDCDMYVNNADIIQEALCFFMDETRGHQIGFVQFPQEFNNITKNDLYANYFCVINEIEQPGMNGQGGALYCGTGCFHRRESLSGTHFKDSRATWDIKPKRSEDKRTVNELNEASKALANCTYEKGTQWGKEMGLVYGIPAEDVVTGLVISCRGWKSIYYNPERKAFLGVAPTTLDVNLVQHKRWGEGLFQIFFSKYCPFFYGHRKISLGLQMGYCAYLLWAPLSLPTLCYAIVPSICTLRGIPLFPQLTSPWFLPFAYAFLATNAYSFCEALSCGSTAKGWWNLQRMKIIRRTTSYFFGFINNITKQLGLSQTKFAVTDKFVSEQTLKRHEQEVFDFGSSSIMFTIIATLAILNLFGFIGGVVRVVMDVEFNSSSQLVLQILLCKLMVMLNKPVYEALFIRNDKGCLPSSVLLESIVLALLACFLAP 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0211 697 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 200 365 IPR029044 -
Glsi08g0211 697 Pfam Cellulose synthase 109 154 IPR005150 GO:0016020|GO:0016760|GO:0030244
Glsi08g0211 697 Pfam Cellulose synthase 375 692 IPR005150 GO:0016020|GO:0016760|GO:0030244
Glsi08g0211 697 Pfam Cellulose synthase 159 356 IPR005150 GO:0016020|GO:0016760|GO:0030244
Glsi08g0211 697 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 158 687 - -
Glsi08g0211 697 SUPERFAMILY Nucleotide-diphospho-sugar transferases 124 466 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0211 Glsi-ChrGlsi08 1834465 1843229 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0211 3 693 Glycosyltransferase AT1G55850 45.344 0.0 647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0211 08 1834465 1843229 Glsi08g0211 08 1834465 1843229 ECH