Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0194 ATGAGTGAAAAGAAGAACTTGGAAGCTGATGGAGGAAAAGTATTGGAAGATAATGGAATTGACGACTTGAAAAAGGATGATGTGAAGGAAATGGAAGTGTATAAGAAAGCTGATGGTGTGGAAGAAGTAGAAGAGGATAAGAAAGCCAATGGTGTGGAAGAAGTAGAAGAGGATAAGAAAGATGATGGCATAACAGAAGAAGAGGATAAGAAAGATGAGGGTGTAAAAGAAGAAGAGGCTAAGAGAGATGATGGTGTAAAAGAAGAGGAAGAGGATAATAAAGAAAATGGTGTAAAGGAAATAGAAGATAAGAAAGATGCAAATGGATCTGAGGCTGAGAAAATGGCTGAAGAGACTGAGGTTAAGGAAATCAAAGAAAGAGAAGAAGTTGAGAAGCCAGAAGTGGATGTGATGGAAGAAGAGGCTACTCCTAATGACAAGGAGGAGACCAATGAAAAGGAAAAAACTGAAGAAGAAGAAGAGAAAGAGAACAAGGATAAGATTAATAAGCCAAAAGAAACTAAGATGGAAGATAGTAAAGTTAAGAAAGGATCGAAAAGGCATGCGAGAGAGAAGATCGATGGGGAGAAAGGTAAAGAGAAAAGAAAGAAAATGATGGAGGTGGAGCCAAGGACTCCTGCTATTGATCGCCCTGTACGTGAAAGGAAATCAGTTGAGAGGTTGGTAACATCAATTGAAAAAGATGCATCCAAAGAATTTCAAATTGAAAAGGGTCGCGGTACACCTTTAAAAGATATACCCAATGTGGCATTTAAATTATCTAGAAGGAAGGCTGATGACACCTTCAGATTGCTCCATACCATTCTTTTTGGAAGGAGAGGGAAGGCAGTTCAGATTAAGAGTAATATATTGAGGTTTTCTGGTTTTGTGTGGCATGAAAATGAGGAAAAGCAACAGATGAAAGTAAAAGAAAAATTTGATAAGTGTAACAAAGAAAAGTTATTGGAATTCTGCGATGTGCTTGACATACCAATTGCCAAGGCAACAACCAGGAAGGAAGATATTGTTACAAAGCTGATAGACTTTTTGGTGGCTCCTCATGCTATGACAACTGTGCTACTTGCAGAAAAAGAGTCAACTAGGGGCAAAAAGCGCACACGCGGGGAGAGAAAAGGCTCATCAGCATCTTGGATCACAACTTCAAAACGTTCTGCTAAGAGTCGTAAGAAAAAAGAAGATTCTTCAGTTGTGGAGGAGAGGAAGAGCACAACTGACACTGAAGATGAGTCAGAGGGAGAGGAGGAAGAAGAGAGAGAAGAGAAAGAAGATGAAGAAAATGAGGAAGAGAATGAAAATGGTGTTCCGGAAAAGTCTGAGGATGAAATGATGAAGGAATCTGAAAGTGAGGACAAAAATGATTCTGGAAATGAATCTGAAGATTTAGAGAAACAGAAAAAGACTACAAAACCATCATCCACAAAGAAAAAATCTGCTGCCAAAACTAAAACCAAGAAAATTACTGTCACACATAAATCTCGCTCAACACCAAGGAGAACACCTAAGAAATCACCATCTACTACCCAGTCAAAGGGTACTGATGATAGCGATGGGAGTCCAAAGGTCTTTTCGAGGAAGAAGAAAAGTGAACAAGTGGGAAAGCAAAAGTCTTCAATTCTGATTAAGTCTGCTTCCAAAGAGAAAACTGAAAAAGTTTTTAAAGGAAAGGGCAAGAACAAAGAGAAGTTGAACCCCAGTGACGAACAGTTGCGAGATGCAACCTGTGAAATTCTTAAAGAAGTGGACTTCAATACGGCCACATTTACTGACATTCTGAAGCAACTTGCTAAGCGATTTAATATGGATCTCACCCCAAGAAAGGCATCTATAAAGCTCATGATTCAGGAAGAGCTGACAAAACTGGCAGATGAAGCAGATGATGAAGATGGAGAGGACGATGCCGAGAAAGATGAAACCCGGTCAGCTGGCCAGGAAGTTAAAGCCTGA 1965 0.3959 MSEKKNLEADGGKVLEDNGIDDLKKDDVKEMEVYKKADGVEEVEEDKKANGVEEVEEDKKDDGITEEEDKKDEGVKEEEAKRDDGVKEEEEDNKENGVKEIEDKKDANGSEAEKMAEETEVKEIKEREEVEKPEVDVMEEEATPNDKEETNEKEKTEEEEEKENKDKINKPKETKMEDSKVKKGSKRHAREKIDGEKGKEKRKKMMEVEPRTPAIDRPVRERKSVERLVTSIEKDASKEFQIEKGRGTPLKDIPNVAFKLSRRKADDTFRLLHTILFGRRGKAVQIKSNILRFSGFVWHENEEKQQMKVKEKFDKCNKEKLLEFCDVLDIPIAKATTRKEDIVTKLIDFLVAPHAMTTVLLAEKESTRGKKRTRGERKGSSASWITTSKRSAKSRKKKEDSSVVEERKSTTDTEDESEGEEEEEREEKEDEENEEENENGVPEKSEDEMMKESESEDKNDSGNESEDLEKQKKTTKPSSTKKKSAAKTKTKKITVTHKSRSTPRRTPKKSPSTTQSKGTDDSDGSPKVFSRKKKSEQVGKQKSSILIKSASKEKTEKVFKGKGKNKEKLNPSDEQLRDATCEILKEVDFNTATFTDILKQLAKRFNMDLTPRKASIKLMIQEELTKLADEADDEDGEDDAEKDETRSAGQEVKA 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0194 654 MobiDBLite consensus disorder prediction 476 505 - -
Glsi08g0194 654 Coils Coil 414 441 - -
Glsi08g0194 654 Gene3D - 562 626 - -
Glsi08g0194 654 MobiDBLite consensus disorder prediction 362 574 - -
Glsi08g0194 654 MobiDBLite consensus disorder prediction 364 378 - -
Glsi08g0194 654 MobiDBLite consensus disorder prediction 627 641 - -
Glsi08g0194 654 PANTHER DEK PROTEIN 88 641 IPR044198 GO:0003677|GO:0006325
Glsi08g0194 654 MobiDBLite consensus disorder prediction 443 475 - -
Glsi08g0194 654 MobiDBLite consensus disorder prediction 547 574 - -
Glsi08g0194 654 MobiDBLite consensus disorder prediction 393 414 - -
Glsi08g0194 654 FunFam DEK domain-containing chromatin associated protein 562 626 - -
Glsi08g0194 654 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 570 625 IPR014876 -
Glsi08g0194 654 Coils Coil 87 127 - -
Glsi08g0194 654 MobiDBLite consensus disorder prediction 524 539 - -
Glsi08g0194 654 MobiDBLite consensus disorder prediction 627 654 - -
Glsi08g0194 654 MobiDBLite consensus disorder prediction 1 208 - -
Glsi08g0194 654 SUPERFAMILY DEK C-terminal domain 566 624 - -
Glsi08g0194 654 MobiDBLite consensus disorder prediction 506 523 - -
Glsi08g0194 654 Pfam DEK C terminal domain 571 624 IPR014876 -
Glsi08g0194 654 Coils Coil 145 167 - -
Glsi08g0194 654 MobiDBLite consensus disorder prediction 415 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0194 Glsi-ChrGlsi08 1689647 1696778 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0194 08 1689647 1696778 Glsi08g0194 08 1689647 1696778 ECH