Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0144 ATGGCCACGCTTCCCTTCACGAGCCCAAATGAGCTGGTCTCATCGTCGTCAATTCCCACTTCAATTTACCACAATGCATTCTCTTCCTCCTCCTTTGTTTCTTTCAACCCCAGAAGAAGAAGTGCTCCTGGACGCCAGAGTCGCCGTTCCGGGTCGGTGAACTGCTCCTTCGCACCTCTTGATAACGCCAAGATCAAGGTGGTCGGCATCGGTGGTGGCGGCAACAATGCTGTTAATCGCATGATTGGTAGTGGTTTACAGGGTGTAGATTTCTATGCAATAAATACTGATGCTCAAGCACTATTACATTCTGCTGCGGAGAACCCCCTTAAAATTGGGGAACTTCTGACTCGTGGATTAGGTACAGGCGGGAATCCACTGTTGGGGGAAGAAGCTGCGGAGGAATCAAAAGAAGCAATTGCTAATGCTCTTAAAGGATCAGATCTTGTGTTTATAACTGCTGGTATGGGTGGGGGCACAGGGTCTGGAGCTGCCCCAGTTGTGGCACGAATATCAAAAGAGGCAGGTTACTTAACTGTTGGTGTGGTTACCTATCCATTCAGTTTTGAAGGACGCAAAAGATCCTTACAGGCACTGGAAGCAATAGAAAAGCTGCAGAAAAATGTTGATACACTTATAGTGATTCCAAATGACCGTCTGCTTGACATTGCTGATGAGCAGACACCCCTTCAGGATGCTTTCCGTCTCGCAGATGATGTTTTGCGCCAAGGAGTACAGGGAATAGCAGACATTATCACTATACCTGGGCTGGTAAATGTGGATTTTGCTGATGTTAAAGCTGTGATGAAAGATTCTGGAACTGCAATGCTTGGTGTAGGTGTTTCCTCCAGCAAAAACCGTGCAGAAGAAGCAGCAGAGCAGGCTACCTTGGCTCCTCTAATTGGATCATCTATTCAGTCAGCTACTGGGGTAGTATATAATATTACTGGAGGAAAGGACATTACCCTGCAGGAGGTGAACAGAGTGTCTCAGGTTGTGACAAGTTTGGCCGATCCTTCTGCTAATATTATATTTGGAGCTGTTGTTGATGATCGCTACAATGGGGAGATTCATGTGACTATCATTGCGACTGGCTTCTCACAGTCGTTTCAAAAGACACTACTAACAGACCCTAGGGCTGCTAAGCTGGTTAACAAAGGAGCTGGAGGCCAAGAAAGCAAGGCACCTCAACTCAAGTCCTCAAGCTCACCATCCACAGTTCCATCTAGAGTTTCCCCACGAAAGCTCTTTTTTTAG 1257 0.4678 MATLPFTSPNELVSSSSIPTSIYHNAFSSSSFVSFNPRRRSAPGRQSRRSGSVNCSFAPLDNAKIKVVGIGGGGNNAVNRMIGSGLQGVDFYAINTDAQALLHSAAENPLKIGELLTRGLGTGGNPLLGEEAAEESKEAIANALKGSDLVFITAGMGGGTGSGAAPVVARISKEAGYLTVGVVTYPFSFEGRKRSLQALEAIEKLQKNVDTLIVIPNDRLLDIADEQTPLQDAFRLADDVLRQGVQGIADIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTIIATGFSQSFQKTLLTDPRAAKLVNKGAGGQESKAPQLKSSSSPSTVPSRVSPRKLFF 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0144 418 CDD FtsZ_type1 77 365 IPR000158 GO:0003924|GO:0005525
Glsi08g0144 418 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 157 163 IPR017975 GO:0005525|GO:0005874|GO:0007017
Glsi08g0144 418 SMART Tubulin_4 64 256 IPR003008 GO:0005525
Glsi08g0144 418 SUPERFAMILY Tubulin C-terminal domain-like 258 373 IPR008280 -
Glsi08g0144 418 Hamap Cell division protein FtsZ [ftsZ]. 60 402 IPR000158 GO:0003924|GO:0005525
Glsi08g0144 418 NCBIfam cell division protein FtsZ 58 373 IPR000158 GO:0003924|GO:0005525
Glsi08g0144 418 Gene3D Tubulin/FtsZ, GTPase domain 59 271 IPR036525 -
Glsi08g0144 418 Pfam Tubulin/FtsZ family, GTPase domain 64 224 IPR003008 GO:0005525
Glsi08g0144 418 ProSitePatterns FtsZ protein signature 1. 95 129 IPR020805 GO:0005525
Glsi08g0144 418 SMART Tubulin_C_4 258 375 IPR018316 -
Glsi08g0144 418 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 37 379 IPR045061 GO:0003924|GO:0005525
Glsi08g0144 418 FunFam Cell division protein FtsZ 1, chloroplastic 229 366 - -
Glsi08g0144 418 PRINTS Cell division protein FtsZ signature 149 169 IPR003008 GO:0005525
Glsi08g0144 418 PRINTS Cell division protein FtsZ signature 177 198 IPR003008 GO:0005525
Glsi08g0144 418 PRINTS Cell division protein FtsZ signature 263 284 IPR003008 GO:0005525
Glsi08g0144 418 PRINTS Cell division protein FtsZ signature 240 262 IPR003008 GO:0005525
Glsi08g0144 418 FunFam Cell division protein FtsZ 1, chloroplastic 57 271 - -
Glsi08g0144 418 ProSitePatterns FtsZ protein signature 2. 148 169 IPR020805 GO:0005525
Glsi08g0144 418 Pfam FtsZ family, C-terminal domain 273 366 IPR024757 -
Glsi08g0144 418 Gene3D - 272 377 IPR037103 -
Glsi08g0144 418 SUPERFAMILY Tubulin nucleotide-binding domain-like 63 259 IPR036525 -
Glsi08g0144 418 MobiDBLite consensus disorder prediction 385 418 - -
Glsi08g0144 418 MobiDBLite consensus disorder prediction 394 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0144 Glsi-ChrGlsi08 1307130 1311969 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0144 08 1307130 1311969 Glsi08g0144 08 1307130 1311969 ECH